Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05752 ATGTTCCATTTCCTCTTTTTTCTTCTCTTTTTCAACTCTCTTTCACCTCTTGCAAATTCTCTAAACCCTGAAGGCTATGTTCTCTTAACACTCAAACAAATCATCAAAGACCCACAAGGTTCCATGAACAACTGGAATTCTTCTGATCAAAACCCATGTTCATGGAATGGAATCACTTGCAAAGACCAAACTGTTGTTTCCATTAGTATCCCAAAAAGGAAACTTTATGGTTCTCTTCCTTCTTCACTAGGATCTCTTTCACAGCTTCGTCATGTCAATTTCAGAAACAATGAACTCTTTGGAGCTTTGCCTCAACAGCTTTTTCAAGCTCAAGGACTTCAAAGTTTGGTTCTTTATGGAAATTCCTTTTCTGGGTCTGTTCCTAGTGAGATTCAGAATCTCAGGTATCTTCAAACTTTAGATTTGTCACAAAATTTCTTTAATGGGTCGTTGCCTGGTTCAATTGTTCAATGTAAGAGACTTAAAACTCTTGTTTTAAGTAGAAACAATTTTACTGGTTTTTTGCCTGATGGATTTGGTACTGGTTTGTCTTCTCTTGAAAAATTAGACCTTTCTTTCAATCAGTTTAATGGGTCAATTCCTAGTGACATGGGAAATTTATCAAGTTTGCAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTTAATTCCAGCTAGCCTTGGAAATTTGCCTGAGAAGGTTTATATTGATCTTACTTACAATAATTTGAAAGGTCCAATACCACAAAATGGTGCTTTGATGAATAGAGGACCAACTGCTTTTATTGGTAATCCTGGTTTATGTGGTCCACCTTTGAAGAATCCATGTGGTTCTGATGTTCCTGCTACTAGTTCACCTTCCTCGAATCCAAATCTTCCTGATAATTCTCCACCAAATGGTGCTGGAAGTGATGTTGGGAGAAGTGAGAAAAACAAAGGGCTAAGTAAAGGTGCTGTGGTTGGCATTGTTGTAGGTGATTTAATTGGAATTTGTCTATTAGGTTTGTTGTTCTCTTTCTTTTACTCGAGGGTTTGCGGTTTTAATCAGGATCAAGAAGAAAATGGTCTTAACAAGGGAAGGAAAGGAGGAAGGAAAGAGTGTTTTTGTTTCAGAAAGGATGATTCTGAGGCACTATCTGATAATGTTGAGCAATATGATCTTGTTCCGTTAGATTCCCAGGTCGCTTTTGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTTGGTAAGAGTGGAATAGGGATTATGTACAAAGTTGTTCTTGAAGAGGGGATTGCTTTGGCTGTGAGAAGATTGGGAGAGGGAGGTTCTCAGAGGTTTAAAGAGTTTCAAACAGAAGTAGAAGCTATAGGGAAGTTAAGACATCCAAATATTGCTACGCTTAGAGCCTATTACTGGTCTGTTGATGAGAAACTTCTCATATATGATTATATTCCAAATGGAAGCCTTGCTACAGCAATTCATGGGAAGCCTGGACTTGTCACATTTACGCCACTAACTTGGCCAGACCGATTGAAAATCATGAAAGGAACTGCAAAAGGATTGACCTATCTGCATGAATTCAGCCCCAAAAAATATGTCCATGGAGATCTGAAGCCAAGTAACATACTTCTTGGACATGACATGACACCCTACATTTCCGATTTCGGACTAGGGCGCCTTGCAAACATTGCCGGTGGTTCACCAACCCTGCAATCGAACCGAGTGGCTGCAGAAAAACTGCAAGAAAGACAAAAGAGCTTGCCCCACGAAGTGGCAGCAAATATTTTGGGAAATGGTTATCAAGCTCCGGAAGCACTAAAAGTGGTGAAGCCATCACAGAAATGGGATGTTTATTCATATGGTGTGATTTTGTTAGAATTGATCACAGGAAGATTACCTATTGTTCAAGTAGGTAACTCAGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATTGAAGAGAAGAAGCCACTCTCAGATGTGTTAGATCCATATTTGGCTGAAGATGCAGATAAAGAAGAAGAGATAATTGGAGTTTTGAAAATTGCAATGGCTTGTGTTAATAGCAGCACTGAAAAGAGACCTACAATGAGGCATGTACTTGATGCTTTGGATAGATTGTCTGTTTCATCTGATTGA 2130 0.3887 MFHFLFFLLFFNSLSPLANSLNPEGYVLLTLKQIIKDPQGSMNNWNSSDQNPCSWNGITCKDQTVVSISIPKRKLYGSLPSSLGSLSQLRHVNFRNNELFGALPQQLFQAQGLQSLVLYGNSFSGSVPSEIQNLRYLQTLDLSQNFFNGSLPGSIVQCKRLKTLVLSRNNFTGFLPDGFGTGLSSLEKLDLSFNQFNGSIPSDMGNLSSLQGTVDLSHNHFSGLIPASLGNLPEKVYIDLTYNNLKGPIPQNGALMNRGPTAFIGNPGLCGPPLKNPCGSDVPATSSPSSNPNLPDNSPPNGAGSDVGRSEKNKGLSKGAVVGIVVGDLIGICLLGLLFSFFYSRVCGFNQDQEENGLNKGRKGGRKECFCFRKDDSEALSDNVEQYDLVPLDSQVAFDLDELLKASAFVLGKSGIGIMYKVVLEEGIALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIATLRAYYWSVDEKLLIYDYIPNGSLATAIHGKPGLVTFTPLTWPDRLKIMKGTAKGLTYLHEFSPKKYVHGDLKPSNILLGHDMTPYISDFGLGRLANIAGGSPTLQSNRVAAEKLQERQKSLPHEVAANILGNGYQAPEALKVVKPSQKWDVYSYGVILLELITGRLPIVQVGNSEMDLVQWIQFCIEEKKPLSDVLDPYLAEDADKEEEIIGVLKIAMACVNSSTEKRPTMRHVLDALDRLSVSSD 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05752 709 SUPERFAMILY Protein kinase-like (PK-like) 410 701 IPR011009 -
Trre2g05752 709 FunFam Leucine-rich repeat receptor-like protein kinase 185 280 - -
Trre2g05752 709 SUPERFAMILY L domain-like 23 275 - -
Trre2g05752 709 MobiDBLite consensus disorder prediction 280 304 - -
Trre2g05752 709 FunFam Leucine-rich repeat protein kinase family protein 481 707 - -
Trre2g05752 709 CDD STKc_IRAK 411 704 - -
Trre2g05752 709 SMART serkin_6 410 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05752 709 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 21 181 - -
Trre2g05752 709 Gene3D Transferase(Phosphotransferase) domain 1 481 709 - -
Trre2g05752 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 158 705 IPR046959 -
Trre2g05752 709 SMART LRR_typ_2 134 158 IPR003591 -
Trre2g05752 709 SMART LRR_typ_2 86 110 IPR003591 -
Trre2g05752 709 SMART LRR_typ_2 183 207 IPR003591 -
Trre2g05752 709 Gene3D Ribonuclease Inhibitor 15 74 IPR032675 -
Trre2g05752 709 Gene3D Ribonuclease Inhibitor 75 281 IPR032675 -
Trre2g05752 709 FunFam Leucine-rich repeat receptor-like protein kinase 388 480 - -
Trre2g05752 709 Pfam Protein kinase domain 411 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05752 709 MobiDBLite consensus disorder prediction 275 312 - -
Trre2g05752 709 ProSiteProfiles Protein kinase domain profile. 405 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05752 709 Pfam Leucine rich repeat 160 211 IPR001611 GO:0005515
Trre2g05752 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Trre2g05752 709 Gene3D Phosphorylase Kinase; domain 1 376 480 - -
Trre2g05752 709 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05752 Trre-Chr2 63302055 63304439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05752 21 709 Receptor kinase-like Gene Family AT2G01210 68.813 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre2g05752 Pkinase 4.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05752 - - gmx:100792873 1154.81