Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05745 ATGGAGGCGCAACAACAACCTCCAACGCCGTCAACCGCGCCGCCCTTATCCTCCGTCGCACCTCCACCACCACACCTCAACTACCCCGAGTCCGTCGATTCCTCTCCCCGCTCCCGCAACACCGACTCATGGGACGAACCTTTCCCTCCGGCGTCATCAAAACTCCGTCTGATGTGCAGTTATGGCGGCCACATCGTCCCTCGTCCACATGACAAATCACTCTGTTACGTCGGTGGTGACACACGAATCGTCGTCGTTGAACGCGCAACCTCACTCGCGGACCTATCCACGCGCCTCTCCAAAACCTTCCTCAACGGAAGATCTTTCACCCTCAAGTATCAACTCCCAAACGAAGACCTAGATTCGTTAATTTCAGTTACCACCGATGAAGACCTAGAAAATATGATCGATGAATACGATCGAACGAATTCGTCAAATTCATCTCTCAAACCCTCGCGAATTCGTCTTTTTCTATTTCCAACTAAACCTGAATCTGCTCAGTCAATTCCTCCGCAAATTCTCGATACTTCTGCGAAATCCGATTATTGGTACCGTGATGCGTTAAACGGCGCCGGATTGCTTAACCGAGGGTTTTCAGATTCTGCTTCTGTTAACTGTCTTTTAGGTCTTGATGACGATGTTGCTGGGAATAATATTGAAACTGGTTCAAGAGAAGCTCCTGAAGGTGTTTCTCAGCCTGGATCTTTTGGGAATTGTAAGAATTTGAAGCAAGATGTTCACTCTGTTCCTGATTCGCCTATGTTGGAGACTACATCGTCTTTTGGTTCAACTTCTTCGTCACCTTCGTTGGCTAATTTGCCTCCGATTAGGGTGCATCAGCAGCAGGATCAGAAGGTTTTGGGAATTGAGGAACAGTTTGCTCAAATGGGAGTTGTTGTTGGTGGAGTTGGACAGAAGCAACAGGATGAGGGATTTGCTGTGATGTCTTCGCCGCCTCATCCTCCGGTGCCGACTACGCTTTCTGTGGCGGCGGTTGGTGTTCCGGTGGTTATTGTTGATTATCAGAATAGGGTTTTCTCTGACGACGAGAGATCGGATCATGGAGTGGCTGTAGGATATAGAAAACCACCAACTCCTCAGCCACAGATTGTTCAAGTTCAACCTCAGGCACAGTCTCAGGCACAATCTCAAGCACAATCTCAAGCACAAACGCAGATACAGTCACAACAACCTCCTCAATTTCAACAGAAGTCAAGTGGTGGCACTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGATAATAGTCTTTCGAATGCAATGTCGCGTCAAACACCTGTTATCTATCAAGAGCAAATTCAGATTCAACCTGGAACTACAAGGGTTCTAAGCAACCATGTGGATCCAAAACTCAACTTGGCTGATTCACATGGTAGGATCCAGGTGCAGCAACATGTACAGGACCCTGGATATTTACTGCAACAGCAATTCGAACTCCAACAGCAGCAACAACAGCCTCAACATCAGCCCCAACATCAGCCCCAACATCAGCAGCAACAACAGCCTCAACATCAGCCCCAACATCAGCAGCAACAACAGCCTCAACATCAGCCCCAACATCAGCAGCAACAACAATTTCAACATCAGCAGCAGCAGCAGTTTATACAGGGTGGACACTACATTCATCATAATCCTGCAATTCCTACATACTATCCTGTATATCCTTCACAGCAACAACCCCATCAGCAGGTTTACTATGTGCCTGCAAGACAGCCACAAGCTTACAATCTTCCTGTGCAGCAGGGTAATATAGGTGAATCTGCCGCAACAATCCCTTCTAGTAGACCCCAAAACCCTCCAAACCCTACTACATTGGTTCAACAAAATGCAGCTTACACCCCCGTCAGAAATGCTCCTCTACCCAAAACTGAAATGACGGCAGCTGCTTACAGAACTGCAACTGCAGGCAACCCTCAATTTGTGCAAGTTCCTACAGGTCAGCATCAGCAGCAATATGTTACTTACTCCCAGATCCACCATCCATCCCAATCCATGGCCCCTAATTCTGCCGCCCCTGCCAATTATGCTTATGAATATGCTGATGCTGCTCAAATATACTACTCGCAGCCTATGGCGCCCACAATGCCGTCACAGTACCAGACCATGGCAGCTGCTAATATGATGCAGCCGGAAGTTTCTGCACAGCATCCATCAGACGGCTTGAAACAGCAGATAAGAACCTCACAGCCACTATAA 2214 0.4783 MEAQQQPPTPSTAPPLSSVAPPPPHLNYPESVDSSPRSRNTDSWDEPFPPASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERATSLADLSTRLSKTFLNGRSFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTNSSNSSLKPSRIRLFLFPTKPESAQSIPPQILDTSAKSDYWYRDALNGAGLLNRGFSDSASVNCLLGLDDDVAGNNIETGSREAPEGVSQPGSFGNCKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHQQQDQKVLGIEEQFAQMGVVVGGVGQKQQDEGFAVMSSPPHPPVPTTLSVAAVGVPVVIVDYQNRVFSDDERSDHGVAVGYRKPPTPQPQIVQVQPQAQSQAQSQAQSQAQTQIQSQQPPQFQQKSSGGTDLPSPDSVSSDNSLSNAMSRQTPVIYQEQIQIQPGTTRVLSNHVDPKLNLADSHGRIQVQQHVQDPGYLLQQQFELQQQQQQPQHQPQHQPQHQQQQQPQHQPQHQQQQQPQHQPQHQQQQQFQHQQQQQFIQGGHYIHHNPAIPTYYPVYPSQQQPHQQVYYVPARQPQAYNLPVQQGNIGESAATIPSSRPQNPPNPTTLVQQNAAYTPVRNAPLPKTEMTAAAYRTATAGNPQFVQVPTGQHQQQYVTYSQIHHPSQSMAPNSAAPANYAYEYADAAQIYYSQPMAPTMPSQYQTMAAANMMQPEVSAQHPSDGLKQQIRTSQPL 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05745 737 MobiDBLite consensus disorder prediction 350 425 - -
Trre2g05745 737 ProSiteProfiles PB1 domain profile. 54 161 IPR000270 GO:0005515
Trre2g05745 737 MobiDBLite consensus disorder prediction 1 49 - -
Trre2g05745 737 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 74 161 - -
Trre2g05745 737 MobiDBLite consensus disorder prediction 251 273 - -
Trre2g05745 737 SUPERFAMILY CAD & PB1 domains 70 169 - -
Trre2g05745 737 CDD PB1_UP2 58 159 - -
Trre2g05745 737 Gene3D - 74 159 - -
Trre2g05745 737 Pfam PB1 domain 70 160 IPR000270 GO:0005515
Trre2g05745 737 PANTHER OS05G0427100 PROTEIN-RELATED 28 531 - -
Trre2g05745 737 MobiDBLite consensus disorder prediction 220 273 - -
Trre2g05745 737 MobiDBLite consensus disorder prediction 31 47 - -
Trre2g05745 737 MobiDBLite consensus disorder prediction 714 737 - -
Trre2g05745 737 SMART PB1_new 69 159 IPR000270 GO:0005515
Trre2g05745 737 MobiDBLite consensus disorder prediction 371 425 - -
Trre2g05745 737 MobiDBLite consensus disorder prediction 484 539 - -
Trre2g05745 737 MobiDBLite consensus disorder prediction 8 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05745 Trre-Chr2 63257118 63259609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05745 51 231 MAP Kinase Kinase Kinase AT1G79570 34.783 1.63e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05745 - - psat:127098305 696.427