Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05744 | ATGGAGGCGCAACAACAACCTCCAACGCCGTCAACCGCGCCGCCCTTATCCTCCGTCGCACCTCCACCACCACACCTCAACTACCCCGAGTCCGTCGATTCCTCTCCCCGCTCCCGCAACACCGACTCATGGGACGAACCTTTCCCTCCGGCGTCATCAAAACTCCGTCTGATGTGCAGTTATGGCGGCCACATCGTCCCTCGTCCACATGACAAATCACTCTGTTACGTCGGTGGTGACACACGAATCGTCGTCGTTGAACGCGCAACCTCACTCGCGGACCTATCCACGCGCCTCTCCAAAACCTTCCTCAACGGAAGATCTTTCACCCTCAAGTATCAACTCCCAAACGAAGACCTAGATTCGTTAATTTCAGTTACCACCGATGAAGACCTAGAAAATATGATCGATGAATACGATCGAACGAATTCGTCAAATTCATCTCTCAAACCCTCGCGAATTCGTCTTTTTCTATTTCCAACTAAACCTGAATCTGCTCAGTCAATTCCTCCGCAAATTCTCGATACTTCTGCGAAATCCGATTATTGGTACCGTGATGCGTTAAACGGCGCCGGATTGCTTAACCGAGGGTTTTCAGATTCTGCTTCTGTTAACTGTCTTTTAGGTCTTGATGACGATGTTGCTGGGAATAATATTGAAACTGGTTCAAGAGAAGCTCCTGAAGGTGTTTCTCAGCCTGGATCTTTTGGGAATTGTAAGAATTTGAAGCAAGATGTTCACTCTGTTCCTGATTCGCCTATGTTGGAGACTACATCGTCTTTTGGTTCAACTTCTTCGTCACCTTCGTTGGCTAATTTGCCTCCGATTAGGGTGCATGTGGAAGATGGTGGTTCTGGTGGTGTTAGGGTACAACAGCAACAACAGCTGCAACAGCAGCAGCAGGATCAGAAGGTTTTGGGAATTGAGGAACAGTTTGCTCAAATGGGAGTTGTTGTTGGTGGAGTTGGACAGAAGCAACAGGATGAGGGATTTGCTGTGATGTCTTCGCCGCCTCATCCTCCGGTGCCGACTACGCTTTCTGTGGCGGCGGTTGGTGTTCCGGTGGTTATTGTTGATTATCAGAATAGGGTTTTCTCTGACGACGAGAGATCGGATCATGGAGTGGCTGTAGGATATAGAAAACCACCAACTCCTCAGCCACAGATTGTTCAAGTTCAACCTCAGGCACAGTCTCAGGCACAATCTCAAGCACAATCTCAAGCACAAACGCAGATACAGTCACAACAACCTCCTCAATTTCAACAGAAGTCAAGTGGTGGCACTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGATAATAGTCTTTCGAATGCAATGTCGCGTCAAACACCTGTTATCTATCAAGAGCAAATTCAGATTCAACCTGGAACTACAAGGGTTCTAAGCAACCATGTGGATCCAAAACTCAACTTGGCTGATTCACATGGTAGGATCCAGGTGCAGCAACATGTACAGGACCCTGGATATTTACTGCAACAGCAATTCGAACTCCAACAGCAGCAACAACAGCCTCAACATCAGCCCCAACATCAGCCCCAACATCAGCAGCAACAACAGCCTCAACATCAGCCCCAACATCAGCAGCAACAACAGCCTCAACATCAGCCCCAACATCAGCAGCAACAACAATTTCAACATCAGCAGCAGCAGCAGTTTATACAGGGTGGACACTACATTCATCATAATCCTGCAATTCCTACATACTATCCTGTATATCCTTCACAGCAACAACCCCATCAGCAGGTTTACTATGTGCCTGCAAGACAGCCACAAGCTTACAATCTTCCTGTGCAGCAGGGTAATATAGGTGAATCTGCCGCAACAATCCCTTCTAGTAGACCCCAAAACCCTCCAAACCCTACTACATTGGTTCAACAAAATGCAGCTTACACCCCCGTCAGAAATGCTCCTCTACCCAAAACTGAAATGACGGCAGCTGCTTACAGAACTGCAACTGCAGGCAACCCTCAATTTGTGCAAGTTCCTACAGGTCAGCATCAGCAGCAATATGTTACTTACTCCCAGATCCACCATCCATCCCAATCCATGGCCCCTAATTCTGCCGCCCCTGCCAATTATGCTTATGAATATGCTGATGCTGCTCAAATATACTACTCGCAGCCTATGGCGCCCACAATGCCGTCACAGTACCAGACCATGGCAGCTGCTAATATGATGCAGCCGGAAGTTTCTGCACAGCATCCATCAGACGGCTTGAAACAGCAGATAAGAACCTCACAGCCACTATAA | 2271 | 0.4791 | MEAQQQPPTPSTAPPLSSVAPPPPHLNYPESVDSSPRSRNTDSWDEPFPPASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERATSLADLSTRLSKTFLNGRSFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTNSSNSSLKPSRIRLFLFPTKPESAQSIPPQILDTSAKSDYWYRDALNGAGLLNRGFSDSASVNCLLGLDDDVAGNNIETGSREAPEGVSQPGSFGNCKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVEDGGSGGVRVQQQQQLQQQQQDQKVLGIEEQFAQMGVVVGGVGQKQQDEGFAVMSSPPHPPVPTTLSVAAVGVPVVIVDYQNRVFSDDERSDHGVAVGYRKPPTPQPQIVQVQPQAQSQAQSQAQSQAQTQIQSQQPPQFQQKSSGGTDLPSPDSVSSDNSLSNAMSRQTPVIYQEQIQIQPGTTRVLSNHVDPKLNLADSHGRIQVQQHVQDPGYLLQQQFELQQQQQQPQHQPQHQPQHQQQQQPQHQPQHQQQQQPQHQPQHQQQQQFQHQQQQQFIQGGHYIHHNPAIPTYYPVYPSQQQPHQQVYYVPARQPQAYNLPVQQGNIGESAATIPSSRPQNPPNPTTLVQQNAAYTPVRNAPLPKTEMTAAAYRTATAGNPQFVQVPTGQHQQQYVTYSQIHHPSQSMAPNSAAPANYAYEYADAAQIYYSQPMAPTMPSQYQTMAAANMMQPEVSAQHPSDGLKQQIRTSQPL | 756 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05744 | 756 | MobiDBLite | consensus disorder prediction | 734 | 756 | - | - | |
Trre2g05744 | 756 | ProSiteProfiles | PB1 domain profile. | 54 | 161 | IPR000270 | GO:0005515 | |
Trre2g05744 | 756 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 74 | 161 | - | - | |
Trre2g05744 | 756 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Trre2g05744 | 756 | MobiDBLite | consensus disorder prediction | 503 | 558 | - | - | |
Trre2g05744 | 756 | CDD | PB1_UP2 | 58 | 159 | - | - | |
Trre2g05744 | 756 | PANTHER | OS05G0427100 PROTEIN-RELATED | 28 | 550 | - | - | |
Trre2g05744 | 756 | SUPERFAMILY | CAD & PB1 domains | 70 | 169 | - | - | |
Trre2g05744 | 756 | MobiDBLite | consensus disorder prediction | 219 | 274 | - | - | |
Trre2g05744 | 756 | MobiDBLite | consensus disorder prediction | 31 | 47 | - | - | |
Trre2g05744 | 756 | MobiDBLite | consensus disorder prediction | 390 | 444 | - | - | |
Trre2g05744 | 756 | Gene3D | - | 74 | 159 | - | - | |
Trre2g05744 | 756 | MobiDBLite | consensus disorder prediction | 251 | 272 | - | - | |
Trre2g05744 | 756 | SMART | PB1_new | 69 | 159 | IPR000270 | GO:0005515 | |
Trre2g05744 | 756 | MobiDBLite | consensus disorder prediction | 369 | 444 | - | - | |
Trre2g05744 | 756 | MobiDBLite | consensus disorder prediction | 8 | 29 | - | - | |
Trre2g05744 | 756 | Pfam | PB1 domain | 70 | 160 | IPR000270 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05744 | Trre-Chr2 | 63257118 | 63259609 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g05744 | 51 | 231 | MAP Kinase Kinase Kinase | AT1G79570 | 34.783 | 2.01e-25 | 111 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05744 | - | - | psat:127098305 | 716.457 |