Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05744 ATGGAGGCGCAACAACAACCTCCAACGCCGTCAACCGCGCCGCCCTTATCCTCCGTCGCACCTCCACCACCACACCTCAACTACCCCGAGTCCGTCGATTCCTCTCCCCGCTCCCGCAACACCGACTCATGGGACGAACCTTTCCCTCCGGCGTCATCAAAACTCCGTCTGATGTGCAGTTATGGCGGCCACATCGTCCCTCGTCCACATGACAAATCACTCTGTTACGTCGGTGGTGACACACGAATCGTCGTCGTTGAACGCGCAACCTCACTCGCGGACCTATCCACGCGCCTCTCCAAAACCTTCCTCAACGGAAGATCTTTCACCCTCAAGTATCAACTCCCAAACGAAGACCTAGATTCGTTAATTTCAGTTACCACCGATGAAGACCTAGAAAATATGATCGATGAATACGATCGAACGAATTCGTCAAATTCATCTCTCAAACCCTCGCGAATTCGTCTTTTTCTATTTCCAACTAAACCTGAATCTGCTCAGTCAATTCCTCCGCAAATTCTCGATACTTCTGCGAAATCCGATTATTGGTACCGTGATGCGTTAAACGGCGCCGGATTGCTTAACCGAGGGTTTTCAGATTCTGCTTCTGTTAACTGTCTTTTAGGTCTTGATGACGATGTTGCTGGGAATAATATTGAAACTGGTTCAAGAGAAGCTCCTGAAGGTGTTTCTCAGCCTGGATCTTTTGGGAATTGTAAGAATTTGAAGCAAGATGTTCACTCTGTTCCTGATTCGCCTATGTTGGAGACTACATCGTCTTTTGGTTCAACTTCTTCGTCACCTTCGTTGGCTAATTTGCCTCCGATTAGGGTGCATGTGGAAGATGGTGGTTCTGGTGGTGTTAGGGTACAACAGCAACAACAGCTGCAACAGCAGCAGCAGGATCAGAAGGTTTTGGGAATTGAGGAACAGTTTGCTCAAATGGGAGTTGTTGTTGGTGGAGTTGGACAGAAGCAACAGGATGAGGGATTTGCTGTGATGTCTTCGCCGCCTCATCCTCCGGTGCCGACTACGCTTTCTGTGGCGGCGGTTGGTGTTCCGGTGGTTATTGTTGATTATCAGAATAGGGTTTTCTCTGACGACGAGAGATCGGATCATGGAGTGGCTGTAGGATATAGAAAACCACCAACTCCTCAGCCACAGATTGTTCAAGTTCAACCTCAGGCACAGTCTCAGGCACAATCTCAAGCACAATCTCAAGCACAAACGCAGATACAGTCACAACAACCTCCTCAATTTCAACAGAAGTCAAGTGGTGGCACTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGATAATAGTCTTTCGAATGCAATGTCGCGTCAAACACCTGTTATCTATCAAGAGCAAATTCAGATTCAACCTGGAACTACAAGGGTTCTAAGCAACCATGTGGATCCAAAACTCAACTTGGCTGATTCACATGGTAGGATCCAGGTGCAGCAACATGTACAGGACCCTGGATATTTACTGCAACAGCAATTCGAACTCCAACAGCAGCAACAACAGCCTCAACATCAGCCCCAACATCAGCCCCAACATCAGCAGCAACAACAGCCTCAACATCAGCCCCAACATCAGCAGCAACAACAGCCTCAACATCAGCCCCAACATCAGCAGCAACAACAATTTCAACATCAGCAGCAGCAGCAGTTTATACAGGGTGGACACTACATTCATCATAATCCTGCAATTCCTACATACTATCCTGTATATCCTTCACAGCAACAACCCCATCAGCAGGTTTACTATGTGCCTGCAAGACAGCCACAAGCTTACAATCTTCCTGTGCAGCAGGGTAATATAGGTGAATCTGCCGCAACAATCCCTTCTAGTAGACCCCAAAACCCTCCAAACCCTACTACATTGGTTCAACAAAATGCAGCTTACACCCCCGTCAGAAATGCTCCTCTACCCAAAACTGAAATGACGGCAGCTGCTTACAGAACTGCAACTGCAGGCAACCCTCAATTTGTGCAAGTTCCTACAGGTCAGCATCAGCAGCAATATGTTACTTACTCCCAGATCCACCATCCATCCCAATCCATGGCCCCTAATTCTGCCGCCCCTGCCAATTATGCTTATGAATATGCTGATGCTGCTCAAATATACTACTCGCAGCCTATGGCGCCCACAATGCCGTCACAGTACCAGACCATGGCAGCTGCTAATATGATGCAGCCGGAAGTTTCTGCACAGCATCCATCAGACGGCTTGAAACAGCAGATAAGAACCTCACAGCCACTATAA 2271 0.4791 MEAQQQPPTPSTAPPLSSVAPPPPHLNYPESVDSSPRSRNTDSWDEPFPPASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERATSLADLSTRLSKTFLNGRSFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTNSSNSSLKPSRIRLFLFPTKPESAQSIPPQILDTSAKSDYWYRDALNGAGLLNRGFSDSASVNCLLGLDDDVAGNNIETGSREAPEGVSQPGSFGNCKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVEDGGSGGVRVQQQQQLQQQQQDQKVLGIEEQFAQMGVVVGGVGQKQQDEGFAVMSSPPHPPVPTTLSVAAVGVPVVIVDYQNRVFSDDERSDHGVAVGYRKPPTPQPQIVQVQPQAQSQAQSQAQSQAQTQIQSQQPPQFQQKSSGGTDLPSPDSVSSDNSLSNAMSRQTPVIYQEQIQIQPGTTRVLSNHVDPKLNLADSHGRIQVQQHVQDPGYLLQQQFELQQQQQQPQHQPQHQPQHQQQQQPQHQPQHQQQQQPQHQPQHQQQQQFQHQQQQQFIQGGHYIHHNPAIPTYYPVYPSQQQPHQQVYYVPARQPQAYNLPVQQGNIGESAATIPSSRPQNPPNPTTLVQQNAAYTPVRNAPLPKTEMTAAAYRTATAGNPQFVQVPTGQHQQQYVTYSQIHHPSQSMAPNSAAPANYAYEYADAAQIYYSQPMAPTMPSQYQTMAAANMMQPEVSAQHPSDGLKQQIRTSQPL 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05744 756 MobiDBLite consensus disorder prediction 734 756 - -
Trre2g05744 756 ProSiteProfiles PB1 domain profile. 54 161 IPR000270 GO:0005515
Trre2g05744 756 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 74 161 - -
Trre2g05744 756 MobiDBLite consensus disorder prediction 1 49 - -
Trre2g05744 756 MobiDBLite consensus disorder prediction 503 558 - -
Trre2g05744 756 CDD PB1_UP2 58 159 - -
Trre2g05744 756 PANTHER OS05G0427100 PROTEIN-RELATED 28 550 - -
Trre2g05744 756 SUPERFAMILY CAD & PB1 domains 70 169 - -
Trre2g05744 756 MobiDBLite consensus disorder prediction 219 274 - -
Trre2g05744 756 MobiDBLite consensus disorder prediction 31 47 - -
Trre2g05744 756 MobiDBLite consensus disorder prediction 390 444 - -
Trre2g05744 756 Gene3D - 74 159 - -
Trre2g05744 756 MobiDBLite consensus disorder prediction 251 272 - -
Trre2g05744 756 SMART PB1_new 69 159 IPR000270 GO:0005515
Trre2g05744 756 MobiDBLite consensus disorder prediction 369 444 - -
Trre2g05744 756 MobiDBLite consensus disorder prediction 8 29 - -
Trre2g05744 756 Pfam PB1 domain 70 160 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05744 Trre-Chr2 63257118 63259609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05744 51 231 MAP Kinase Kinase Kinase AT1G79570 34.783 2.01e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05744 - - psat:127098305 716.457