Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05737 ATGGCGGTGAAGCTTCTCGAAACTGAAGATGAACACGGCGGTCTGAAGACGAACACAAAGATAGAGATGGCGGCGAGTAGGGTTGATGACGGCGAGAATAGAGATGAGCGCAGGAAAAAGTATGATGAGTATTCAAAAATCCTACATGATTATGTGCATGTTAGAAAACGTAATCGCTATTATGATCCTTTTTATGATGAGTTTATTTACCGTCTCAAGGTAAGAGTGAAAGAGGTGCTTAAAGGGCATACGGATTTAATTTTGGGATTCAACACCTTCCTACCAAAGAAACATCAATTCACACTTCCCCTTCAACTTGAGACCACTGGGAAAAAGGTGAAGGTAGAAGAGAATTGTGAACTTCCATGGGATGTACTTGATATCATTTCCAAAGCATTGGATTTTGACTCGCACTTTCAGTTTGCCGGTGTGTGCAAGAGTTGGAGGGTTTTTCATAAAATTTACTGGAGAAATTTTTTGGCATCACAAGAACCATTACTTCTTCAAACTACAATTTACATAATGGAATCATGTTCCTTTATTAGCATACCCAATCAAAAAGTTTATTCCTCAGAGATGTTGAAGTACTTCTTTGACAACTCGTTCTATGTTACGTCTTCTAGTGGATATTTTATCTTACAGGGATACACATTTAATCATTCATTTATGCTAGTCAATCCATTTACCAAAAAAAAGAAGGTAATTGATACCTCTACGTGTGAATTTAATTCTTATATCTACGATAAGCACAATGACCATGCCTTGCTTGCTTTTGGTAAATGCTCTGAGGAATTTGTTTTGGTCTTTTTATGCAAATATGATATGAGTTTGCATGTCTATCAATCTCGAAATTGTGAATGGGTTACTTATTCAACAAAGGAAAGTAGAGAGAAGGTTGTTGACTTTGTGGTTTTGCATGATATGATATATGTGGTCACTGACAAGGCCAATATAGGGGTACTCAACTTGAATTATGCAAATATCAAATTTCTGAAATTGAAGAGTACTCCTGATGTATTATGTAAACTAAATCTTAGGTTGGTTAATTGTGATGAGCAACTTTTCGTGGTTGATTGGGACATGGAAAAAATGAATGTGTATAAGATAGACTTTTCAACCATGAATTATGTCAGACTGAAAACTTTGGGTGACATTGCATTATTTTATGTTAAGGGCAAACATTGTAGTGCATTGAGCAGCCCGGACAAGTGGGGTTATGAGAGAAACTCGGTATATGTCATCAATCGTGAATCTATAAAATATAGTGTATATTCAGGGGATGAAAACAAGTTGCAAAAGGACATTATGCTTCCATCTCCTCTAGGAACATGTTCCTCCTTGTTCGATTGGTATTTTAGACATCTAAAATATGAGGTAGATTATTCTTTAGTTGAGTAA 1398 0.3612 MAVKLLETEDEHGGLKTNTKIEMAASRVDDGENRDERRKKYDEYSKILHDYVHVRKRNRYYDPFYDEFIYRLKVRVKEVLKGHTDLILGFNTFLPKKHQFTLPLQLETTGKKVKVEENCELPWDVLDIISKALDFDSHFQFAGVCKSWRVFHKIYWRNFLASQEPLLLQTTIYIMESCSFISIPNQKVYSSEMLKYFFDNSFYVTSSSGYFILQGYTFNHSFMLVNPFTKKKKVIDTSTCEFNSYIYDKHNDHALLAFGKCSEEFVLVFLCKYDMSLHVYQSRNCEWVTYSTKESREKVVDFVVLHDMIYVVTDKANIGVLNLNYANIKFLKLKSTPDVLCKLNLRLVNCDEQLFVVDWDMEKMNVYKIDFSTMNYVRLKTLGDIALFYVKGKHCSALSSPDKWGYERNSVYVINRESIKYSVYSGDENKLQKDIMLPSPLGTCSSLFDWYFRHLKYEVDYSLVE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05737 465 PANTHER OS09G0392200 PROTEIN 59 454 IPR044619 -
Trre2g05737 465 SUPERFAMILY F-box domain 120 188 IPR036047 GO:0005515
Trre2g05737 465 SUPERFAMILY PAH2 domain 37 97 IPR036600 GO:0006355
Trre2g05737 465 Gene3D Paired amphipathic helix 30 98 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05737 Trre-Chr2 63168680 63172577 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre2g05737 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05737 - - cam:101488742 463.381