Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05732 ATGGAGAAAGTTTGTGAATTCTGCACAGCACTGAGGCCACTTGTTTACTGTAATGCTGATGCAGCATATCTTTGTCTATCTTGTGATGCAAAGGTTCATTGGGCGAATGAATTGTCTGGCCGGCACATCCGGACCCTTGTGTGTAACTCGTGCAGATGCGATCTTGCTTATGTTCAGTGCTTGGATCACAAAATGTTAATCTGTCGAGACTGTGATCAAAAGTTGCACGATAGTTCTTCACCACATCGCAAACGAGCTGTCAAAACATTTATCGGCTGCCCTTCTGCCAAAGAGTTTGCAGCACTTTGGGGATTTGAATTTAAGGAGATTGAAAAGAGTGTTTTCAGTCGGAAGGATCAGTTTGCAGTTGCATCTATTTCTTCCGTTTCTACGGATGTGAATGTGATCAAGCATCGTCGCGTTCAAACCAGGGTCGCCTCGACAGCATCTGCGGCTAAACTTTATAAGGGTTCCAGCAGTCAACAAGGTCAGATATTGTACGGTGATCAAGAACGGCAAACTATTCTGCAGCAGATTGTTGATTTAAAACGGTTTCAGCTAAACGAGGAGAATCATCATTCTACAAAGGTAAATGGACTACAAGTGGATGAGAAATTCAATCAACAAGTACAAAATTCCCATAATTTTGCTACTAATCTTCTGGGAGGAGACAATACTATTGCGGAGCTGAATCCCGAAACTTTCTCATCCGCGTTTTCTCAGCTTGATAATTTGTCTTCATCTTCAATTATGGACTTTCCTTTGCATGGAGAGTTGTTTTGGACTTGCAAAAGCTCACTTCAAAGTAATCAGTTATGGCCGCAAAATATTCAAGACCTGGGAATATGCGAAGAACTTGTTTGTGGAGACGATTTTAACATACCGGACGTTGACTTAACATTCCAAAACTATGAGGAACTATTTGGAGGAGACCAAGATCCAATTAGAGGAGTAATGTTTGGTGGAAAAGATGTCTCTTGCTCTTCTTTGGAGAATGATATTGACAATCCAAGTGCAATGGAGGTCTGA 1029 0.4159 MEKVCEFCTALRPLVYCNADAAYLCLSCDAKVHWANELSGRHIRTLVCNSCRCDLAYVQCLDHKMLICRDCDQKLHDSSSPHRKRAVKTFIGCPSAKEFAALWGFEFKEIEKSVFSRKDQFAVASISSVSTDVNVIKHRRVQTRVASTASAAKLYKGSSSQQGQILYGDQERQTILQQIVDLKRFQLNEENHHSTKVNGLQVDEKFNQQVQNSHNFATNLLGGDNTIAELNPETFSSAFSQLDNLSSSSIMDFPLHGELFWTCKSSLQSNQLWPQNIQDLGICEELVCGDDFNIPDVDLTFQNYEELFGGDQDPIRGVMFGGKDVSCSSLENDIDNPSAMEV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05732 342 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Trre2g05732 342 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 303 - -
Trre2g05732 342 CDD Bbox1_BBX-like 4 47 - -
Trre2g05732 342 SMART bboxneu5 1 47 IPR000315 GO:0008270
Trre2g05732 342 SMART bboxneu5 48 87 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05732 Trre-Chr2 63133484 63134992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05732 1 315 C2C2-CO-like Transcription Factor Family AT1G68190 38.080 2.68e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05732 - - cam:101505436 510.76