Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05655 ATGGCTACGTTTTCAATCGGAACACACTTGTCTATGTTCCAACATTCACGGAATTCTAAACTTTCATCTCATCCTCTTCACACAATTCAATCTTCGCCGTCACAATCACAACCTTTCTTAGTTTCTTCTTCTTGTAGAAACAGATTCGGAGTTCCCAATCCCAAGTTACTCCGTAATAATGTATTGGCACGTGCTGAAGACAAAGCTAGAGATTCAAACTCTTCTTTTCAGCCTCCACAAAGTTCCCAACAACAGTTCCAGGAATTGACATCAGAATCTGGAACTTGTGATCCTTTATGTTCAGTTGATGAAACAAGCTCACAAGATTTTGAAGATAACTATCAGCCCAAGACTGATTTGCTCAAAGCCGTTGCGGTATTTGCCGCGGCTGCAACTGGGACAGTTGCAATTAACCATTCTTGGGTCGCGGCAAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATCATATTTGAAGAATCTTTAGCATTCAACAAAAGTGGGGTTGGACTATTGATGGCTGTAAGCTTATGGGTGATACGGAGTATTGGGGCTCCGTCAACTGATATAGCTGTCTCAGAGCTATCTCATGCATCTGCCGAAGTCAGTGAAATAGTGTTCTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTTAAGATAGTTACGGACAATATAAAAACCCGAAACCCACGCCTTCTCCTTTGGGTGGTTGGATTTATTACATTTTTTCTCAGTTCAGTTCTGGACAACCTTACATCCACCATAGTCATGGTTTCTCTGTTGCGGAAATTAGTACCTCCATCAGAATATCGAAAGATTCTTGGAGCTGTTGTTGTAATAGCAGCAAATGCTGGTGGTGCTTGGACTCCTATTGGTGATGTCACAACTACTATGCTGTGGATACATGGCCAAATAACTACAGTTGAAACAATGAAGGGTTTGTTTTTGCCTTCAGCCATTTCTCTAGCTGTTCCACTGGCTCTAATGTCCTTGACTAGTGAAGTTAATGGCAAGGGGCAGGATTCTCCCGATGTCTTGTCATCTGAACAGATGGCTCCACGGGGACAGCTTGTTTTCTCGGTGGGTTTAGGAGCTTTGATTTTTGTCCCCGTGTTCAAGGCCGTCACAGGTTTGCCTCCGTACATGGGGATGTTGCTTGGACTTGGCGTGCTTTGGATCCTGACTGATGCGATCCATTATGGTGAATCTGAAAAGAGAAAGAAGCTTAAAGTGCCACAGGCACTATCAAGGATAGATACTCAAGGAGCACTATTCTTCCTTGGAATTCTATTATCTGTTAGCAGCCTGGAGGCGGCAGGTATTCTTCGGGAAATAGCAAACTACCTTGATGCTCATGTCCAAAATAGTGAACTAATTGCAAGTGCTATTGGAGTCATATCTGCGATAATAGACAATGTTCCATTGGTTGCTGCAACGATGGGAATGTACGATGTCACATCATTCCCTCAAGATTCTGAGTTTTGGCAATTGGTTGCATTTTGTGCTGGTACCGGTGGATCCATGTTAGTTATTGGCTCAGCTGCGGGAGTTGCATTCATGGGGATGGAAAAAGTGGACTTCTTTTGGTACTTTAAAAAGGTTAGTGGCTTTGCTTTTGCAGGTTATGCTGCTGGTATTGCCGCATACTTAGCCGTTCATAACCTCAACATCTCCATACCAACAACTCTAGCCGAGGTTCCTTTTCTTCCTGGTTCTTAA 1755 0.4313 MATFSIGTHLSMFQHSRNSKLSSHPLHTIQSSPSQSQPFLVSSSCRNRFGVPNPKLLRNNVLARAEDKARDSNSSFQPPQSSQQQFQELTSESGTCDPLCSVDETSSQDFEDNYQPKTDLLKAVAVFAAAATGTVAINHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTDIAVSELSHASAEVSEIVFFLLGAMTIVEIVDAHQGFKIVTDNIKTRNPRLLLWVVGFITFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQITTVETMKGLFLPSAISLAVPLALMSLTSEVNGKGQDSPDVLSSEQMAPRGQLVFSVGLGALIFVPVFKAVTGLPPYMGMLLGLGVLWILTDAIHYGESEKRKKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDAHVQNSELIASAIGVISAIIDNVPLVAATMGMYDVTSFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYFKKVSGFAFAGYAAGIAAYLAVHNLNISIPTTLAEVPFLPGS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05655 584 MobiDBLite consensus disorder prediction 67 88 - -
Trre2g05655 584 NCBIfam sodium:proton antiporter NhaD 175 405 - -
Trre2g05655 584 MobiDBLite consensus disorder prediction 72 88 - -
Trre2g05655 584 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 59 584 IPR045016 GO:0006814|GO:0015297
Trre2g05655 584 MobiDBLite consensus disorder prediction 16 40 - -
Trre2g05655 584 Pfam Citrate transporter 159 515 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05655 Trre-Chr2 62515817 62521111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05655 1 584 Antiporters AT3G19490 77.133 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05655 - - gmx:100779521 900.582