Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05652 ATGATGAAACTTAACACACTCTTGAAAGTTTCATCTTTTCTTCTTCTACTGTTACTTCAATATTCATCTGCTCTTAACTCTGATGGAATTTTCTTACTTAAATTCAGATACTCAATCCTCAGTGACCCTTTATCAGTCTTTGATAACTGGAACTATGATGATGCAACTCCATGTTCATGGCATGGAGTTGCATGCAGTGAAGTAGGAACTCCTAATACACCTGATTCCTTCAGAGTAACTAGCTTAATCCTTCCAAATAATCAACTTCTTGGTTCCATTGCAGAAGATTTAGGCTTAATCCAAAACCTTAATCACATTGATCTCTCAAACAATTTCCTCAATGGTTCATTACCAAACTCTATCTTCAACTCTTCTCAACTACAATTCCTCTCACTCTCCAACAATGTCATCTCAAGTAAACTACCTGAGTTGATTGGTTTATCAACAAACCTTCAAATTCTTAACCTTTCTGATAATGCCTTTGGTGGTTCCATCCCAAAAAACCTCACTTCTCTACAGAATCTAACAGTTGTTTCTTTAAAAAGTAACTATTTTTCTGGTCAAATTCCAAATGGGTTCAACTCTGTTAAGATTCTAGATCTGTCCTCAAATTTACTCAATGAATCTCTTCCAAATAACTTCCAAGGCCAAAATCTTCAATACTTCAATCTCTCTTATAATAAACTCTCAGGGGCAATTCCACAAACATTTGCTAAGCACATTCCTGAAAACTCAACAATTGATCTCTCCTTCAACAATCTAACAGGACCAATACCTGAATCTATTGCTTTACTCAATCAAAAAACAGAATCATTCTCTGGAAATTCTGATCTATGTGGAAAACCACTGAAAAATCTTTGTACTATTCCCTCTAGTATCTCAACTCCACCAAATATCACAAACACATCTTCACCAGCAATTGCAGCTATACCAAGAACAATTGATTCAACACCAGGAACAAACACAACATCAACAGAAACAACTAGTGATTCTTCTCAGAATGGTTTAAAACCTACTACAATAGCAGCCATTGTTGTAGGTGATATACTTGGCATGGCAGTTTTGGCTCTTATCATTCTTTTTGTATATCAACAAAGAAAGAAAAGATATCCAAATCCAAAATCAAACACTGTTCTTCAAAACAAAAAAGTATCAGAATCTGTTGCAAAACAAGATCAAGAATCTCTAAAACCACACTCACTTCCATGTTCTTCATGTTGTTTAACAATTAAACAAGAAGAAACATCAGAAGAAGATCCAAGTTCCGATGAAAGCGACCGCGACACTAACATTATTACAGTTGATAATCCGAAAGAAGGCACGCTTGTGACGGTCGATGGCGAGACGAAGATGGATTTGGAGACATTGTTGAAGGCTTCAGCTTATATACTTGGAACAAGTAAAGTGAGTATTGTGTATAAAGCAGTTTTACAAGATGGAAGAGTTTTTGCTGTTAGAAGAATTGGTGAGTGTTGTGTTGAAAGAATGAAGGAATTTGAGAATCATGTGAGAGGTATTGCAAAGATTAAGCATCCTAATTTGGTTAAGATTCGTGGATTCTGTTGGGGTGAAGATGAAAAGCTTGTGATTTCTGATTATGTTCCTAATGGCAGCTTATCCACTAATGGTTACAGAAGAGGAAGTGCGTCCCCAATGAACTTATCCTTGGAGTTGCGGTTGAAGATAGCAAAAGGGGTAGCAAGAGGACTAGCATTCATTCATGAGAAGAAACATGTGCATGGCAATGTTAAACCAAGCAATATCTTATTAAATTCAGAAATGGAACCTATCATAAGTGATTTTGGACTTGACTTACTTCTCTTGAATGATATCAACCACAAAGGAAACGGTTCAGCTAGACAATTAGTGAACCAAAGAACCCAACAACAAAACCAAGAGCTACTTATTGGTTCAACAACTTCTAGCCCATATGCTACAATGGGGTCATCATCATCTACTAATGGTAGTGGTCAAGTGCAATATCAAGCACCAGAATCTTTTCAAAACATAAAACCAAACCACAAATGGGATGTTTATTCATTTGGAGTTGTTTTGTTGGAGCTTTTAAGTGGAAGGGTTTTTTCGGACCGGGAATTGGACCAGTGGTCCATTTCCGGTTCGGTTGAAGAGGAGAAAAACCGGGTTTTGAGAATGGTTGATGTGGCAATTAAGCATGAGATTGAAGGTAGAGAAAATGTGGTGTTTACTTGTTTTAAGTTGGGGTTGAATTGTGTTTCTCTTGTCCCACAAAAGAGACCGTCCATGAAAGAAGCACTACAAATTTTAGAGAAGATCCCTACTGTTGGTATTAATTAA 2316 0.367 MMKLNTLLKVSSFLLLLLLQYSSALNSDGIFLLKFRYSILSDPLSVFDNWNYDDATPCSWHGVACSEVGTPNTPDSFRVTSLILPNNQLLGSIAEDLGLIQNLNHIDLSNNFLNGSLPNSIFNSSQLQFLSLSNNVISSKLPELIGLSTNLQILNLSDNAFGGSIPKNLTSLQNLTVVSLKSNYFSGQIPNGFNSVKILDLSSNLLNESLPNNFQGQNLQYFNLSYNKLSGAIPQTFAKHIPENSTIDLSFNNLTGPIPESIALLNQKTESFSGNSDLCGKPLKNLCTIPSSISTPPNITNTSSPAIAAIPRTIDSTPGTNTTSTETTSDSSQNGLKPTTIAAIVVGDILGMAVLALIILFVYQQRKKRYPNPKSNTVLQNKKVSESVAKQDQESLKPHSLPCSSCCLTIKQEETSEEDPSSDESDRDTNIITVDNPKEGTLVTVDGETKMDLETLLKASAYILGTSKVSIVYKAVLQDGRVFAVRRIGECCVERMKEFENHVRGIAKIKHPNLVKIRGFCWGEDEKLVISDYVPNGSLSTNGYRRGSASPMNLSLELRLKIAKGVARGLAFIHEKKHVHGNVKPSNILLNSEMEPIISDFGLDLLLLNDINHKGNGSARQLVNQRTQQQNQELLIGSTTSSPYATMGSSSSTNGSGQVQYQAPESFQNIKPNHKWDVYSFGVVLLELLSGRVFSDRELDQWSISGSVEEEKNRVLRMVDVAIKHEIEGRENVVFTCFKLGLNCVSLVPQKRPSMKEALQILEKIPTVGIN 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05652 771 Gene3D Ribonuclease Inhibitor 25 194 IPR032675 -
Trre2g05652 771 Gene3D Ribonuclease Inhibitor 195 289 IPR032675 -
Trre2g05652 771 Gene3D Transferase(Phosphotransferase) domain 1 534 768 - -
Trre2g05652 771 PANTHER OS05G0588300 PROTEIN 175 766 - -
Trre2g05652 771 Pfam Protein kinase domain 463 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05652 771 Gene3D Phosphorylase Kinase; domain 1 433 533 - -
Trre2g05652 771 CDD TM_EGFR-like 339 369 - -
Trre2g05652 771 MobiDBLite consensus disorder prediction 312 335 - -
Trre2g05652 771 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Trre2g05652 771 FunFam Leucine-rich repeat receptor-like protein kinase 194 289 - -
Trre2g05652 771 FunFam Nuclear pore complex protein NUP107 25 191 - -
Trre2g05652 771 ProSiteProfiles Leucine-rich repeat profile. 126 148 IPR001611 GO:0005515
Trre2g05652 771 SUPERFAMILY Protein kinase-like (PK-like) 463 765 IPR011009 -
Trre2g05652 771 ProSiteProfiles Protein kinase domain profile. 458 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05652 771 SUPERFAMILY L domain-like 29 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05652 Trre-Chr2 62491173 62494072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05652 24 765 Receptor kinase-like Gene Family AT2G15300 50.392 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre2g05652 Pkinase 8.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05652 - - gmx:102667237 988.793