Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05648 ATGGATAGAGATTATCACAGTGGCAGGGGTTTACCGCACTATCTACAGTTTGGACATGTTTGGGTTCTAACCTTATCACCCTCAGAACTTGTCTACACTGCTGCTACTTCTCGCAGCTTTTGTGCGGGTGTTTCAAAGAGAGGTGATGAGAGGGTGCTTCAAGAACAACGCCGAGAAAAGTTGACGTCGAAGCTAGAGAAGATGAGTGCGGGTGCACTTCTTCAGAATGCCAAGGTGAGAACCGTTCCGGTTCAGCATCAGGGAGGAGGATGCGCATTGTGCAGGGATGATGGTTTTAAGGTGACATTTGGTCCTCAAACCCTAATGATTTGCACTCAATGCGAGAAAGAATACCACGTCGGCTGTTTGAAAAGATATTGCATAGAAGATTTAGAGGAACTGCCTAGGGGTAGTTGGTTTTGTTCAAACAACTGCCGCGACATTCATTCCGGATTGATGAATTTGGTTGCTTCCGGGGACAATAGTATTCCCGAGCATTTTCAAAAACTCATGAGAAAAAAGCAGGGTGTTGGACTCGATATTAAATGGAGACTCCTTAACCGAAAATTATTTCCATGGGATGACACTAACCCATTACTATCAAAAGCGCATGCCATCTTTGGTGAAAGGTTTCGATTAATGTTTGAGTCTGACGGTGCTGATGTTATCAGAGGAATGATCCTTGGAAAGAACTTGGAAGACCAAGATTTGAGTGGATTTTATTGTGCGGTTCTTACCGTAGGGCGATCTGTAGTTTCGGCAGCGCTGTTTCGGGTCCTTGGGTCACAGATAGCGGAGGTTCCGCTGGTGGCTACATCAATAAAACATGACGGCAAGGGATACTTTCAATGCTTATTTGGTTGCATTGAGAGGTTCCTTGCCTCTCTAGGTGTCGATTCATTTGTCCTCCATGCTTGCCAACAAGCTAAACCAATGTGGATTAGAAAATTCCGGTTTAGCAAACTCGGTAAATCAGAGATCAAGCATCTGAAGAGAAATTATAAGTTGATTTCTCTTGAAAGGACGGAATTGCTACGCAAACCGGTTGAGGAAGAAAATTAG 1062 0.4426 MDRDYHSGRGLPHYLQFGHVWVLTLSPSELVYTAATSRSFCAGVSKRGDERVLQEQRREKLTSKLEKMSAGALLQNAKVRTVPVQHQGGGCALCRDDGFKVTFGPQTLMICTQCEKEYHVGCLKRYCIEDLEELPRGSWFCSNNCRDIHSGLMNLVASGDNSIPEHFQKLMRKKQGVGLDIKWRLLNRKLFPWDDTNPLLSKAHAIFGERFRLMFESDGADVIRGMILGKNLEDQDLSGFYCAVLTVGRSVVSAALFRVLGSQIAEVPLVATSIKHDGKGYFQCLFGCIERFLASLGVDSFVLHACQQAKPMWIRKFRFSKLGKSEIKHLKRNYKLISLERTELLRKPVEEEN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05648 353 PANTHER AUTOIMMUNE REGULATOR 83 349 - -
Trre2g05648 353 SUPERFAMILY FYVE/PHD zinc finger 91 146 IPR011011 -
Trre2g05648 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 148 IPR013083 -
Trre2g05648 353 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 236 328 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05648 Trre-Chr2 62469345 62475189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05648 84 350 PHD Transcription Factor Family AT2G36720 41.877 2.42e-65 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05648 - - gmx:100803825 285.034