Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05620 ATGGAAACCAAAGTTGATGAACTTCAAGTAATGGAACATTTGACCACACCACCAACAACTGGGACCAGTTTCTCTCAGTTACTATTAGAAGATGATAATGATAATGAATTGGTTCTTGGTGATGGTGGTGTGGACCAAACCTTTTCAACCTCTTTTTTCTCTCTTCATAACACACCTAAAATGCTTTGTTTTGGAAACTATCAAAATGAAATGGAAATTGAAACCAACCTCATAATAACTCCTCAGAAATCTGTTATCACTTCAAGTGATTCTTCTTCTGCTTCTTCATGCAACCATGCTAACACTGGTTTCAATTCCTTAACAACAACAACTAAACCCAATGGTATGCAGAAAAAGCGGAATGGGTCAGGAGGAGGAGGACAAGAACTTGGGACCAAAGCAGGTGTTGGAGGGCAGAGATGTCCTAAGAAAACCAAAGCAGAGAACAACCCCACTTCAACTGGACATGCAAAGAAAAAGGAGAAGCTTGGTGAAAGAATTGCAGCATTACAACAACTTGTTTCTCCCTTTGGCAAGACTGATACAGCTTCAGTGCTTCACGAGGCTACTGGTTACATAAGATTCTTACATGAACAAGTTCAGGTTCTGTGCTCACCATACCTGCAACCTTCACAAATTCAATTTCAAAATCACCCTGGGGACGGAGATAACAATGGAGAAGAAGTGGAGAAAGATTTGAGGAGCAGAGGTTTATGTTTGATCCCTGTTGGATGCACCCTACACGTGGCAAGTACTAATGGTGCTGATTATTGGTCACCTGCAACAATAGGGAACAATGTTTCACCTTCAACTATTACTAAGCAGTAA 828 0.407 METKVDELQVMEHLTTPPTTGTSFSQLLLEDDNDNELVLGDGGVDQTFSTSFFSLHNTPKMLCFGNYQNEMEIETNLIITPQKSVITSSDSSSASSCNHANTGFNSLTTTTKPNGMQKKRNGSGGGGQELGTKAGVGGQRCPKKTKAENNPTSTGHAKKKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIRFLHEQVQVLCSPYLQPSQIQFQNHPGDGDNNGEEVEKDLRSRGLCLIPVGCTLHVASTNGADYWSPATIGNNVSPSTITKQ 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05620 275 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 249 - -
Trre2g05620 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 214 IPR036638 GO:0046983
Trre2g05620 275 Gene3D - 157 214 IPR036638 GO:0046983
Trre2g05620 275 MobiDBLite consensus disorder prediction 89 162 - -
Trre2g05620 275 MobiDBLite consensus disorder prediction 89 118 - -
Trre2g05620 275 CDD bHLH_AtbHLH_like 158 203 IPR045239 -
Trre2g05620 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05620 Trre-Chr2 62275796 62277649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05620 130 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 47.727 6.16e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05620 - - aprc:113873132 293.893