Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05619 ATGGAAACCAAAGTTGATGAACTTCAAGTAATGGAACATTTGACCACACCACCAACAACTGGGACCAGTTTCTCTCAGTTACTATTAGAAGATGATAATGATAATGAATTGGTTCTTGGTGATGGTGGTGTGGACCAAACCTTTTCAACCTCTTTTTTCTCTCTTCATAACACACCTAAAATGCTTTGTTTTGGAAACTATCAAAATGAAATGGAAATTGAAACCAACCTCATAATAACTCCTCAGAAATCTGTTATCACTTCAAGTGATTCTTCTTCTGCTTCTTCATGCAACCATGCTAACACTGGTTTCAATTCCTTAACAACAACAACTAAACCCAATGGTATGCAGAAAAAGCGGAATGGGTCAGGAGGAGGAGGACAAGAACTTGGGACCAAAGCAGGTGTTGGAGGGCAGAGATGTCCTAAGAAAACCAAAGCAGAGAACAACCCCACTTCAACTGGACATGCAAAGCAGAAAAAGGAGAAGCTTGGTGAAAGAATTGCAGCATTACAACAACTTGTTTCTCCCTTTGGCAAGACTGATACAGCTTCAGTGCTTCACGAGGCTACTGGTTACATAAGATTCTTACATGAACAAGTTCAGGTTCTGTGCTCACCATACCTGCAACCTTCACAAATTCAATTTCAAAATCACCCTGGGGACGGAGATAACAATGGAGAAGAAGTGGAGAAAGATTTGAGGAGCAGAGGTTTATGTTTGATCCCTGTTGGATGCACCCTACACGTGGCAAGTACTAATGGTGCTGATTATTGGTCACCTGCAACAATAGGGAACAATGTTTCACCTTCAACTATTACTAAGCAGTAA 831 0.4079 METKVDELQVMEHLTTPPTTGTSFSQLLLEDDNDNELVLGDGGVDQTFSTSFFSLHNTPKMLCFGNYQNEMEIETNLIITPQKSVITSSDSSSASSCNHANTGFNSLTTTTKPNGMQKKRNGSGGGGQELGTKAGVGGQRCPKKTKAENNPTSTGHAKQKKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIRFLHEQVQVLCSPYLQPSQIQFQNHPGDGDNNGEEVEKDLRSRGLCLIPVGCTLHVASTNGADYWSPATIGNNVSPSTITKQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05619 276 MobiDBLite consensus disorder prediction 89 163 - -
Trre2g05619 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Trre2g05619 276 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 250 - -
Trre2g05619 276 Gene3D - 156 215 IPR036638 GO:0046983
Trre2g05619 276 MobiDBLite consensus disorder prediction 89 118 - -
Trre2g05619 276 CDD bHLH_AtbHLH_like 157 204 IPR045239 -
Trre2g05619 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 215 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05619 Trre-Chr2 62275796 62277649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05619 157 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 55.660 1.93e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05619 - - gmx:100809317 300.056