Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05603 ATGCTGCGTTTGTGCTTCAACCCTCTCGATTATTGCTTCCGACGCCGTGGTGCCTCTGATTTTCTTCTCTGGCACACCGACTTAAAACCTCATGCTTCCGGTGATTTCTCTATAGCCGTCGCTCAGGCTAATTACAGCCTCGAAGATCAGAGTCAAGTATTTACCTCACCTTCCGCTACCTATGTCGGTGTTTACGACGGTCATGGTGGTCCCGAAGCTTCTAGATTCGTCAACAACCGTCTTTTCCCTTATTTGCACAAATTTGCCTCTGAGCAAGGGGGATTGTCAGCAGATGTTATAAAAAAAGCATTTAGTGCGACTGAGGAGGATTTTTTGCATTTGGTTAAGTTGTCGTTACCAGTTAGTCCTCAGATTGCATCTGTTGGATCGTGCTGTCTTCTCGGTGCAATTTCTAATAATGTGTTGTATGTGGCTAACCTCGGAGATTCCAGAGTTGTTCTTGGCAGGAGGTATTCTGAGAACAAGAATTATCCGGTGGAGGCTGTGCGCTTGTCAACAGATCATAATGTAGCAGACGAGGAGGTGAGGAGAGAAGTGGAAGCTCTCCACCCTGATGATTCACACATTGTGGTTTATACGCGTGGAGTTTGGAGGATTAAGGGCATCATACAGGTATCTAGATCTATTGGCGATGTGTATTTGAAGAGACCAGATTTCTACAGAGACCCCATTTTTCGGCAATTTGTAAATCCTATTCCTTTGAAGCGTCCAGTTATGACAGCTGAACCATCAGTCATTATTAGGGAGATAGAGTCGGATGATTTATTCTTGATATTTGCATCAGATGGCCTTTGGGAACAATTAAGTGATGAAGCCGCAGTTGATATTGTTTTCAAATCTCCAAGAGTCGGAATTGCCAAGAGACTAGTAAGAGCTGCTCTTCAGGAAGCTGCAAAGAAAAGAGAGATGAGATATGCTGACATAAAGAAAATTGACAAAGGAATTAGACGACACTTCCATGACGATATCACTGTTATTGTAATCTATCTTGATCACCATGGAGGTTCTTCTAGTGATGGTGGATTTAAGCAAACTGCTGTTGGCTATACAACTGCCCCTGTTGATATATTTTCTCTAAATGCTGATGAAGCTGAGAAGAGTATGCTTGGTTCAGTTGCTTAA 1143 0.4304 MLRLCFNPLDYCFRRRGASDFLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNNRLFPYLHKFASEQGGLSADVIKKAFSATEEDFLHLVKLSLPVSPQIASVGSCCLLGAISNNVLYVANLGDSRVVLGRRYSENKNYPVEAVRLSTDHNVADEEVRREVEALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPIFRQFVNPIPLKRPVMTAEPSVIIREIESDDLFLIFASDGLWEQLSDEAAVDIVFKSPRVGIAKRLVRAALQEAAKKREMRYADIKKIDKGIRRHFHDDITVIVIYLDHHGGSSSDGGFKQTAVGYTTAPVDIFSLNADEAEKSMLGSVA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05603 380 PANTHER PROTEIN PHOSPHATASE 34 336 IPR015655 GO:0004722|GO:0006470
Trre2g05603 380 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Trre2g05603 380 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Trre2g05603 380 FunFam Probable protein phosphatase 2C 42 26 345 - -
Trre2g05603 380 Gene3D - 26 343 IPR036457 -
Trre2g05603 380 SUPERFAMILY PP2C-like 44 339 IPR036457 -
Trre2g05603 380 SMART PP2C_4 29 335 IPR001932 -
Trre2g05603 380 CDD PP2Cc 48 337 IPR001932 -
Trre2g05603 380 Pfam Protein phosphatase 2C 56 306 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05603 Trre-Chr2 62121893 62123992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05603 17 363 PP2C-type Phosphatase Gene Family AT3G51370 55.211 1.28e-140 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05603 - K01102 gmx:100812137 646.351