Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05557 ATGATGGGTGATGAGAGAGTAGCGAGGCGACAAATTGGTAGGAAAGGAAGTATGGCGCGAATGTGGCTGATGATGGGCAGTGATGGGCAGAGACAGTTGGTGGAGGCAGGGAGACAGTTGATAATGCAGCGGACGGGACTAACAGCTAGGGACCTTAGGAATCTTGATCCAATGTTGACCTACCCTTCAACAATTGTAGGGCGTGACAAAGCAATGGTCTTAAACTTGGAACAAATAAAGGCTATCATTACTGCTCATGAGGTTCTTTTGCTCAATTCTAGAGATCCTTCTGTTATCCCTTTTGTTGATGAACTTCATGCAAGGATTATTGATCATCACTGTATTGCTACTACTGATCATTCTCAGGAGGGTCAAAATGGGGAGGATAAAGGTGAAATAAAGAGAGATAGCAGCAACAATATTAAAATTCTTCCATTTGAATTTGTTGTGTTGGAGGCATGCCTTGAAGCTGTTATTAGTTCCTTAGAAAATGAGGCAAATATATTGGAATTGGAGGCTTTCCCAGCCTTAGATAAGCTAACATCAAAGATTAGTACTCTTAATTTGGAACGCGTTCGTCATATTAAGAGTCGATTGGTTGCCTTAACTTCTCGTGTTCAAAAGGTAAGGGATGAACTAGAAAACTTGTTGGATGATGATGGAGATATGGCTGAGCTATATCTCACAGACAAGTTGGCTCGACAGAAGTTTGAAATATTTTCTGCTGCTTCATCCATGAATAATATCGAGGATGACATGATTACAAATCGAGTTCTTCAACAAGATATAGTTGACAGGACTCGTCCTGAAATATCATTGGAACAAGGTGAAGATTTAATTGATCATGAAGATTATGAAAATGTCGTTAGTGGTGAAATCTCTGGAACACAAGATGCTGCTGTCTCTAGTAGTGCACCAAATGTTCAGGAGCTTGAGATGCTCTTAGGAGCAAGGTTGTCAGAATCGAGAGTTTACGTTAACTCTTTTTGCCTAGGAGCATACTTTGTCCAAATTGGAGCCACATTGAACAAATTAGCCGCGCTAGCTGAATATGTCGAGGACACGGAGGACTACATAAACATAACATTGGACGACAAACAGAACCGTATTCTACAAGCAGGAGTTCAGATAGGAACAGCAAGTGTGATTGTGAATTTCTTTGTTGTTGTGACAGGTATTTTTGGAATGAATATTCATATTGACATATATGACAGTCCTGTGAATTCGGTGTTCGTTGAGACAGTTTTTGGATGCACTGCTACTTGCATAGTCTTATACTTCCTTGCAATGTTTTGGTACAAGAAAAGGCGCATACTCTAA 1320 0.403 MMGDERVARRQIGRKGSMARMWLMMGSDGQRQLVEAGRQLIMQRTGLTARDLRNLDPMLTYPSTIVGRDKAMVLNLEQIKAIITAHEVLLLNSRDPSVIPFVDELHARIIDHHCIATTDHSQEGQNGEDKGEIKRDSSNNIKILPFEFVVLEACLEAVISSLENEANILELEAFPALDKLTSKISTLNLERVRHIKSRLVALTSRVQKVRDELENLLDDDGDMAELYLTDKLARQKFEIFSAASSMNNIEDDMITNRVLQQDIVDRTRPEISLEQGEDLIDHEDYENVVSGEISGTQDAAVSSSAPNVQELEMLLGARLSESRVYVNSFCLGAYFVQIGATLNKLAALAEYVEDTEDYINITLDDKQNRILQAGVQIGTASVIVNFFVVVTGIFGMNIHIDIYDSPVNSVFVETVFGCTATCIVLYFLAMFWYKKRRIL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05557 439 Gene3D - 6 93 - -
Trre2g05557 439 Gene3D Magnesium transport protein CorA, transmembrane region 100 370 - -
Trre2g05557 439 FunFam Magnesium transporter MRS2-1 10 93 - -
Trre2g05557 439 CDD Mrs2_Mfm1p-like 22 438 IPR039204 -
Trre2g05557 439 Coils Coil 152 172 - -
Trre2g05557 439 Coils Coil 199 219 - -
Trre2g05557 439 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 10 438 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05557 Trre-Chr2 61800475 61803258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05557 22 439 MRS2 Gene Family AT3G19640 51.092 5.22e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05557 - - ccaj:109817554 412.149