Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05533 ATGTCAATTGTTTCTTTCAAGTTATCATTTCCCTTTTTTTTTCTTTTTCTCCTTCTTCTCATTATTAGTATTGTATCTCAAGCAAAAGCCCAGCCAAATTTTTTGTACAACTTTTGTATAAACGATAATGGCAACTACACAGCCAATAGTACATATCAAACCAACCTCAACATCCTTTTGTCCAATCTCTCTTCCAACACAGAAATCAACTACGGTTTCTACAATTTCTCTTATGGCCAAAACACCGACAAAGTAAACGCCATTGGACTCTGCAGAGGAGATGTTAAACCTGATGTTTGCCGCAATTGTCTCAACAATTCAAGAGTTCTTCTAACACAACTTTGTCCAAATCAAAAAGAAGCAATTGGTTGGTATGACAAATGCATGTTGCGCTACTCCAACCGATCAATATTTGGCATTATGGAAGGTTTACCTTCGTTTTACATGTCAAACAGTAACAATGTAACACAGGTGGATCAATTTAATCAAGTTCTTGGAAACTTGATGAAGAAATTGAAAGAAAAAGCTGCATCAAGTAATGACTCTCGTGTTAAGTATGCTACGGGTAATGAAACTGATGTGAAGTTGAATTTTCAAACCATATATGGTCTAGTTCAATGTACACCTGATTTATCATTACAAGATTGCATGCATTGTTTAGAAGATGCTATCTTAGAAATTCCAAGTTGTTGTAATAACAAACTCGGTGGTAGAGTTGTTAAACCAAGTTGTATTATGAGATTTGAATCAGCTATCTTCTACGATCCTACGCCAGCTGTAGTAGACACAGATGAAACCTCTTCACCACAAGAAAAAAGCAAATCATCTCATACTGCCATTGCCATAGTTGTGCCTATTGTTGTTGTAGTTCTTGTTCTGCTAACTTTGATCATTTGCATATGCTTAAGGAGAAATCGCCATAGTATGGCAGGGTCAAATCTCGAAGGTGAAGAGGAAATGATGATTGCTGAGTCATTGCAATTTAATTTTGATATCATACGAGTTGCTACAAGTGATTTCTCTGATTCTAATAAACTTGGACAAGGTGGATTTGGAATTGTTTATAGGGGCCAACTGCCTAATAGGCAAATGATTGCTGTCAAAAGATTGTCAACAAATTCTGGCCAAGGAGACTTGGAATTCAAAAATGAAGTACTTTTAGTAGCCAAACTTCAACATCGAAATTTAGTTAGGCTACTTGGTTTTAGTTTGGAAAGGAGAGAAAGATTGCTTATTTATGAATTTGTTCCAAATAAAAGTCTTGATTACTTTATATTCGATCCAACAAGGAAAACAGAATTGAATTGGGAAAAGCGCTACAATATCATAAAAGGTATTGCCCGTGGTATTCTTTATCTTCATGAGGATTCTCGCTTGCGAATTATACACCGTGATCTTAAAGCAAGCAATATTCTCTTAGACGACGAGATGAATCCTAAGATATCTGATTTTGGATTGGCAAGACTGTTTGTTATCGGTCAAACTCAAGGAAGTACAAATAGAATCGTCGGAACCTATGGATATATGGCACCTGAGTATGCTATGCATGGAGAATTTTCAGTAAAATCAGATGTTTTCAGTTTTGGAGTATTGGTTCTTGAAATTATAAGTGGTCATAAAAATAGTGCAAACATTTGTCATGGGGAGGATGTGGAATATCTATTGACCTATGCATGGAGAAGTTGGAGAGAAGGGAAAGCTATAAATATTATAGATCCATCATTAAGCAACATTTCAAAAGATGAAATAATGAGATGCATCCATATTGGTTTACTTTGTATTCAAGAAAATGTAGTTGACAGACCAACCATGGCTTCTGTTGCACTCATGCTTAATAGTAATACTCTCACTCTCTCAATACCTTCGAAACCTGCGTATTTTATGGGAAATGGAAGTAGAAGACTACAAGACATGCAGCAACAAGTTGATAATGTAAGTGCAGCAAGATCGGATGAATCGGTTAACCAAATTTCAATTACTGATGCATACCCACGATAG 1998 0.3589 MSIVSFKLSFPFFFLFLLLLIISIVSQAKAQPNFLYNFCINDNGNYTANSTYQTNLNILLSNLSSNTEINYGFYNFSYGQNTDKVNAIGLCRGDVKPDVCRNCLNNSRVLLTQLCPNQKEAIGWYDKCMLRYSNRSIFGIMEGLPSFYMSNSNNVTQVDQFNQVLGNLMKKLKEKAASSNDSRVKYATGNETDVKLNFQTIYGLVQCTPDLSLQDCMHCLEDAILEIPSCCNNKLGGRVVKPSCIMRFESAIFYDPTPAVVDTDETSSPQEKSKSSHTAIAIVVPIVVVVLVLLTLIICICLRRNRHSMAGSNLEGEEEMMIAESLQFNFDIIRVATSDFSDSNKLGQGGFGIVYRGQLPNRQMIAVKRLSTNSGQGDLEFKNEVLLVAKLQHRNLVRLLGFSLERRERLLIYEFVPNKSLDYFIFDPTRKTELNWEKRYNIIKGIARGILYLHEDSRLRIIHRDLKASNILLDDEMNPKISDFGLARLFVIGQTQGSTNRIVGTYGYMAPEYAMHGEFSVKSDVFSFGVLVLEIISGHKNSANICHGEDVEYLLTYAWRSWREGKAINIIDPSLSNISKDEIMRCIHIGLLCIQENVVDRPTMASVALMLNSNTLTLSIPSKPAYFMGNGSRRLQDMQQQVDNVSAARSDESVNQISITDAYPR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05533 665 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Trre2g05533 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 661 - -
Trre2g05533 665 SMART serkin_6 340 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05533 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Trre2g05533 665 FunFam Cysteine-rich receptor-like protein kinase 10 145 253 - -
Trre2g05533 665 ProSiteProfiles Gnk2-homologous domain profile. 143 253 IPR002902 -
Trre2g05533 665 Gene3D - 145 253 IPR038408 -
Trre2g05533 665 Gene3D - 31 136 IPR038408 -
Trre2g05533 665 SUPERFAMILY Protein kinase-like (PK-like) 324 611 IPR011009 -
Trre2g05533 665 Pfam Protein tyrosine and serine/threonine kinase 343 551 IPR001245 GO:0004672|GO:0006468
Trre2g05533 665 CDD STKc_IRAK 346 612 - -
Trre2g05533 665 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Trre2g05533 665 FunFam cysteine-rich receptor-like protein kinase 10 416 618 - -
Trre2g05533 665 Gene3D Transferase(Phosphotransferase) domain 1 416 619 - -
Trre2g05533 665 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 137 - -
Trre2g05533 665 Pfam Salt stress response/antifungal 153 250 IPR002902 -
Trre2g05533 665 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Trre2g05533 665 Gene3D Phosphorylase Kinase; domain 1 303 415 - -
Trre2g05533 665 ProSiteProfiles Protein kinase domain profile. 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05533 665 FunFam Cysteine-rich receptor-like protein kinase 10 303 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05533 Trre-Chr2 61625902 61636118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05533 29 627 Receptor kinase-like Gene Family AT4G38830 51.216 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g05533 Pkinase 7.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05533 - - gmx:100791056 813.527