Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05529 | ATGTCAATTGTTTCTTTCAAGTTATCATTTCCCTTTTTTTTTCTTTTTCTCCTTCTTCTCATTATTAGTATTGTATCTCAAGCAAAAGACCAGCCAAATTTTTTGTACAACTTTTGTATAAACGATAATGGCAACTACACAGCCAATAGTACGTATCAAAACAACCTTAACATCCTTTTATCCAATCTCTCTACCAACACTGAAATCGACTATGGTTTCTACAATTTCTCTTATGGCCAAAACAATGACAAAGTAAACGCCATTGGACTCTGCAGAGGAGATGTTAAACCTGATGTTTGCCGCAATTGTCTCAATGATTCAAGAGTTCTTCTTACACGACTTTGTCCAAATCAAAAAGAAGCAATTGGTGGGTATGAAAACTGCATGCTGCGCTATTCAAACCGATCAATATTTGGCATTATGGAAGGTTCACCTACATTTTATATGTGGAACACAAACAGTGTAACCGAGGTGGATCAATTTAATCGAGTTCTTGGGAACTTGATGAAGAAACTGAAAGAAAAAGCTGCATCAAGTGACGACTCTCGTTTTAAGTATGCTACGGGTAATGCAACTGATGTGAATTTGATTTTTCAAACCATATATGGTCTAGTGCAGTGTACACCTGATTTATCATTACAAGATTGCAATCGTTGTTTAGATGCGGCTATCTCAGAAATTCCAAGTTGTTGTAATAACAAGATTGGTGCTAGAGTTGTTAAACCAAGTTGTATTATTAGATATGAATCCTTTCTCTTCTACGATCCTCCACCTGTAGTAGACCCAGATGAACCCTCTCCACCACAAGAAAAAAGCAAATCATGGCATACTACCATTGCCATAGTTGTGCTGACTGTTGTTCTAGTTGTTGCTCTGTTAAGTTTCATTTGCATCTGCTTAATGAGAAATCGCCGCAAGGAATGGTTAAATCTTGAAGAAATAGAAGATGATGATAATGATTATATTGAAATTGCCGAGTCATTGCAATTCAACTTTGACACAATACGAGTTGCTACAAGTAACTTTTCCGAAGCTAATAAACTCGGACATGGCGGATTTGGAGTTGTTTATCGGGGTAAACTCTCCGGTGGACAAGTGATTGCGGTAAAAAGGTTGTCAAGAGATTCTGGACAAGGAGATATTGAATTTAAGAATGAAGTGCTTTTGCTAGTTAAACTTCAACATCGAAATTTAGTTAGATTACTTGGTTTTTGTCTAGAAGGAAGAGAAAGACTGCTTGTGTATGAATTTGTTCATAATAAAAGCCTTGATTACTTTATATTTGATCCAATAAAGAAAGCAGAACTAGATTGGGAAAGGCGCTACAAAATCATTGAGGGTATTGTGAGAGGACTTCTTTACCTTCATGAGGATTCTCAACTTCGTATTGTACATCGTGATCTTAAAGCAAGTAACATTCTTTTGGACGAGAATATGAATGCTAAAATATCAGATTTTGGTATGGCCAGATTACTTGTTGATCAAACTCAAGTAAATACAGATAAAGTCGTTGGAACATAG | 1521 | 0.3609 | MSIVSFKLSFPFFFLFLLLLIISIVSQAKDQPNFLYNFCINDNGNYTANSTYQNNLNILLSNLSTNTEIDYGFYNFSYGQNNDKVNAIGLCRGDVKPDVCRNCLNDSRVLLTRLCPNQKEAIGGYENCMLRYSNRSIFGIMEGSPTFYMWNTNSVTEVDQFNRVLGNLMKKLKEKAASSDDSRFKYATGNATDVNLIFQTIYGLVQCTPDLSLQDCNRCLDAAISEIPSCCNNKIGARVVKPSCIIRYESFLFYDPPPVVDPDEPSPPQEKSKSWHTTIAIVVLTVVLVVALLSFICICLMRNRRKEWLNLEEIEDDDNDYIEIAESLQFNFDTIRVATSNFSEANKLGHGGFGVVYRGKLSGGQVIAVKRLSRDSGQGDIEFKNEVLLLVKLQHRNLVRLLGFCLEGRERLLVYEFVHNKSLDYFIFDPIKKAELDWERRYKIIEGIVRGLLYLHEDSQLRIVHRDLKASNILLDENMNAKISDFGMARLLVDQTQVNTDKVVGT | 506 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05529 | 506 | ProSiteProfiles | Gnk2-homologous domain profile. | 34 | 137 | IPR002902 | - | |
Trre2g05529 | 506 | Pfam | Protein kinase domain | 343 | 506 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g05529 | 506 | Gene3D | Phosphorylase Kinase; domain 1 | 307 | 417 | - | - | |
Trre2g05529 | 506 | Gene3D | Transferase(Phosphotransferase) domain 1 | 418 | 506 | - | - | |
Trre2g05529 | 506 | ProSiteProfiles | Gnk2-homologous domain profile. | 143 | 253 | IPR002902 | - | |
Trre2g05529 | 506 | SMART | serkin_6 | 342 | 504 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g05529 | 506 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 303 | 417 | - | - | |
Trre2g05529 | 506 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 40 | 506 | - | - | |
Trre2g05529 | 506 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | 32 | 137 | - | - | |
Trre2g05529 | 506 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 463 | 475 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g05529 | 506 | Gene3D | - | 31 | 136 | IPR038408 | - | |
Trre2g05529 | 506 | Gene3D | - | 144 | 253 | IPR038408 | - | |
Trre2g05529 | 506 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 145 | 253 | - | - | |
Trre2g05529 | 506 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase B120 | 418 | 506 | - | - | |
Trre2g05529 | 506 | Pfam | Salt stress response/antifungal | 155 | 249 | IPR002902 | - | |
Trre2g05529 | 506 | Pfam | Salt stress response/antifungal | 39 | 134 | IPR002902 | - | |
Trre2g05529 | 506 | ProSitePatterns | Protein kinases ATP-binding region signature. | 348 | 370 | IPR017441 | GO:0005524 | |
Trre2g05529 | 506 | ProSiteProfiles | Protein kinase domain profile. | 342 | 506 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g05529 | 506 | SUPERFAMILY | Protein kinase-like (PK-like) | 324 | 506 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05529 | Trre-Chr2 | 61590544 | 61592894 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g05529 | 6 | 506 | Receptor kinase-like Gene Family | AT4G05200 | 47.490 | 1.01e-152 | 450 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Trre2g05529 | Pkinase | 2.1e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05529 | - | - | gmx:100791056 | 627.476 |