Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05523 | ATGGTCGCTCCAGGCCACCCAGCACTCCCAGCCATCGCTGCCTGTCGCCCCAAGCCACGGCTGATATGTAGTGGATATATGGCTCCTGAATATGCAATGTTTGGACAATTTTCAGCAAAATCAGATGTTTTTAGTTTTGGCGTATTAGTCCTGGAGATTATAAGTGGCCAAAAAATTAGCCAACTTTTTCATGGGCAGGAGGATTTACTTAGCTTTGCATGGAGAAACTGGAGGGAAGGTACAATCACAGATATAATAGATCCATCATTAAGCAACAGTTCACAAAATGAAATAATGAGATGCATTCACATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACTATGGCAACCATTGTACTCATGCTTAGTAGTTATTCCATATCTCTCCCGGTACCTTTGGAGCCTGCATCTTTTATTGGTGGAAGAACTAGAAGCCTTCCAGGTTCAGACATGCAATATGGGGACGATAATTCAGGGGCGATAAGATCAAACGAATCCAAGGTTATCAGAAAAGCAATCAGCAAACAAGTATTCAAAGTCTGA | 555 | 0.4162 | MVAPGHPALPAIAACRPKPRLICSGYMAPEYAMFGQFSAKSDVFSFGVLVLEIISGQKISQLFHGQEDLLSFAWRNWREGTITDIIDPSLSNSSQNEIMRCIHIGLLCVQENLVDRPTMATIVLMLSSYSISLPVPLEPASFIGGRTRSLPGSDMQYGDDNSGAIRSNESKVIRKAISKQVFKV | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05523 | 184 | SUPERFAMILY | Protein kinase-like (PK-like) | 23 | 126 | IPR011009 | - | |
Trre2g05523 | 184 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 25 | 162 | - | - | |
Trre2g05523 | 184 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase B120 | 13 | 131 | - | - | |
Trre2g05523 | 184 | Pfam | Protein tyrosine and serine/threonine kinase | 23 | 124 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g05523 | 184 | Gene3D | Transferase(Phosphotransferase) domain 1 | 16 | 133 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05523 | Trre-Chr2 | 61573766 | 61574660 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g05523 | 25 | 140 | Receptor kinase-like Gene Family | AT4G21410 | 65.833 | 1.74e-48 | 165 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Trre2g05523 | PK_Tyr_Ser-Thr | 2.3e-09 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05523 | - | - | gmx:100782800 | 206.068 |