Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05523 ATGGTCGCTCCAGGCCACCCAGCACTCCCAGCCATCGCTGCCTGTCGCCCCAAGCCACGGCTGATATGTAGTGGATATATGGCTCCTGAATATGCAATGTTTGGACAATTTTCAGCAAAATCAGATGTTTTTAGTTTTGGCGTATTAGTCCTGGAGATTATAAGTGGCCAAAAAATTAGCCAACTTTTTCATGGGCAGGAGGATTTACTTAGCTTTGCATGGAGAAACTGGAGGGAAGGTACAATCACAGATATAATAGATCCATCATTAAGCAACAGTTCACAAAATGAAATAATGAGATGCATTCACATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACTATGGCAACCATTGTACTCATGCTTAGTAGTTATTCCATATCTCTCCCGGTACCTTTGGAGCCTGCATCTTTTATTGGTGGAAGAACTAGAAGCCTTCCAGGTTCAGACATGCAATATGGGGACGATAATTCAGGGGCGATAAGATCAAACGAATCCAAGGTTATCAGAAAAGCAATCAGCAAACAAGTATTCAAAGTCTGA 555 0.4162 MVAPGHPALPAIAACRPKPRLICSGYMAPEYAMFGQFSAKSDVFSFGVLVLEIISGQKISQLFHGQEDLLSFAWRNWREGTITDIIDPSLSNSSQNEIMRCIHIGLLCVQENLVDRPTMATIVLMLSSYSISLPVPLEPASFIGGRTRSLPGSDMQYGDDNSGAIRSNESKVIRKAISKQVFKV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05523 184 SUPERFAMILY Protein kinase-like (PK-like) 23 126 IPR011009 -
Trre2g05523 184 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 162 - -
Trre2g05523 184 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 13 131 - -
Trre2g05523 184 Pfam Protein tyrosine and serine/threonine kinase 23 124 IPR001245 GO:0004672|GO:0006468
Trre2g05523 184 Gene3D Transferase(Phosphotransferase) domain 1 16 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05523 Trre-Chr2 61573766 61574660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05523 25 140 Receptor kinase-like Gene Family AT4G21410 65.833 1.74e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g05523 PK_Tyr_Ser-Thr 2.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05523 - - gmx:100782800 206.068