Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05518 ATGATTTCTTCCATTTCGCTTCTGCTATCCCTTCTAATCCCTCTATTTTTCACACTAAAATCCAAAGCCAACGCCCAACTAGTTTTCCGCTACCACGAATGTAACCAAAATTACGGAAACTTCACCGATACCAGTGCCTACAAGAACAACCGTAACACCGTATTACAACAAATATTATCCAACAAAACAATAGACTACGGTTTCTTCAATTTCTCTTACGGCAATAAACCTAACAAAATATACGCCATTGGACTCTGTCGAGGAGATATAGAACCAGTTGATTGCCTTGGTTGCCTAACAACTTCCGCAGCACTTCTCACAGACCGATGTCCAATACAAAAAGAAGCAATTGGTTACTACGACTCGTGCATCTTACGCTATTCAGACTATCAATTTTTTGGCACGGTGGAAACTAAAACCAGTAATTTTTACTCTATCGAACCCAAGACAGTGGTGGAAGATGCATTTAAGCAAAAACTTAATATCTTATTGGACGAACTTATTAGCACAGCCGCGAATGGTGACTCGCGTAAGAAGTTTGCCGAAAAGAGTGTTAAAGTAATTGATAAACCAAGTAGTAATGAGACTATATATGGTTTGGTTCAGTGTACACCAGATTTGACCAAGCAAGATTGTAGTACATGTTTGGATTCTGTTTCCCAAGGTCTTTCAAATTTCTGTGGAGATATGAAAGGTTGTTTATATCTTGGACCAAGTTGTTCTATTAGATATGATATCATTCCATTTTTTAAATCCATAAGAGGAGTTAAAAACAAAGATTCACCAGCACCACAGCCACAACCTTCGGAAACAAATGCTAATGCACTTCCTCCTACAACTGTGAAAGGAAACAGAAGGAAATTAAGAACTGTCATCGCTATCGTTGTAGCAGTTGTGGCCGGCATACTGCTTATTGCGGCCATCGCCATTGTTGTACGTACTTATTTTGAAAGGAGGAAACCAAGACCCCTATATACGCCTGAATTTGAAGGCCAAGAGAAAAATGAAGATGAATTTGAAGCAGAAGCTGGTAATGATCTTAAAGTTGGTGATTTGTTGCAATTTGACTTTGAAACCGTCAGATTAGCTACAAACAACTTCTCTGATGCAAATAAGCTTGGTCAAGGTGGATTTGGAACTGTTTACAAGGGTATGCTCTCTGATGGACAAGATATTGCTATCAAAAGGTTGGCTAATAATTCTAAGCAAGGAGAAACAGAATTTAAGAATGAAGTGTTGCTGACAGGAAAGCTTCAACATAGAAACTTAGTTAAGCTACTAGGTTTCTGCTTACAAAGAAGAGAAAGATTACTAATATATGAGTTTGTCACTAACAAAAGTCTTGATTATATCATATTTGATCCAATCAAGCGTGCAAATTTGAGTTGGGAAAGACGCTACAAAATCATAAGAGATATTGCTCGTGGTCTTCTTTACCTTCATGAAGATTCTCGATTACAAATTGTTCATCGTGATCTCAAAATAAGTAACATTTTGTTAGATGAAGAGATGAACCCAAAAATAACAGATTTTGGCATTGCAAAATTGTTTGATGCCAATCAAACTGATGGCACAACGAAAACTGTTATTGGAACTTTTGGATATATGGCTCCCGAGTACATCAGACATGGACAATTTTCAGTCAAGTCAGATGTGTTCAGTTATGGTGTAATCATTTTAGAAATTGTTTGTGGCCGAAAAGTCATCGAGAATCGTGGCGGGGATAATATAGAGGATCTATTAAGCATTGCATGGAGAAATTGGAAGGCAGGGACAACTTCAGATATTGTAGATCCAATATTAGACCAAGGTTTTAATAAGAATGAAAAATTGAGAAGCATCCATGTTGGACTACTTTGTGTTCAAGAAGATATAAATGTGAGACCAACTATGAGTTCCGTTTTACAAATGCTTAGTAGTAGCACTTACCCACTTCCTGTGCCTTCTGAACCTCCATTCTTAATGCAACCCAAAAGGGCATTATCTATAGCATTAAGTGGCCAATATTCAGGTTCCACAAAGTCAAGTGATTCTGGATCAGGAAGTCAATTTACTCAAGGATCAACAAGTAAGTCCTTAGCTATAGATCAATAA 2094 0.3749 MISSISLLLSLLIPLFFTLKSKANAQLVFRYHECNQNYGNFTDTSAYKNNRNTVLQQILSNKTIDYGFFNFSYGNKPNKIYAIGLCRGDIEPVDCLGCLTTSAALLTDRCPIQKEAIGYYDSCILRYSDYQFFGTVETKTSNFYSIEPKTVVEDAFKQKLNILLDELISTAANGDSRKKFAEKSVKVIDKPSSNETIYGLVQCTPDLTKQDCSTCLDSVSQGLSNFCGDMKGCLYLGPSCSIRYDIIPFFKSIRGVKNKDSPAPQPQPSETNANALPPTTVKGNRRKLRTVIAIVVAVVAGILLIAAIAIVVRTYFERRKPRPLYTPEFEGQEKNEDEFEAEAGNDLKVGDLLQFDFETVRLATNNFSDANKLGQGGFGTVYKGMLSDGQDIAIKRLANNSKQGETEFKNEVLLTGKLQHRNLVKLLGFCLQRRERLLIYEFVTNKSLDYIIFDPIKRANLSWERRYKIIRDIARGLLYLHEDSRLQIVHRDLKISNILLDEEMNPKITDFGIAKLFDANQTDGTTKTVIGTFGYMAPEYIRHGQFSVKSDVFSYGVIILEIVCGRKVIENRGGDNIEDLLSIAWRNWKAGTTSDIVDPILDQGFNKNEKLRSIHVGLLCVQEDINVRPTMSSVLQMLSSSTYPLPVPSEPPFLMQPKRALSIALSGQYSGSTKSSDSGSGSQFTQGSTSKSLAIDQ 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05518 697 FunFam cysteine-rich receptor-like protein kinase 10 443 645 - -
Trre2g05518 697 PIRSF SRK 12 84 IPR024171 GO:0004674
Trre2g05518 697 PIRSF SRK 201 690 IPR024171 GO:0004674
Trre2g05518 697 MobiDBLite consensus disorder prediction 668 697 - -
Trre2g05518 697 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 682 - -
Trre2g05518 697 ProSiteProfiles Protein kinase domain profile. 367 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05518 697 Gene3D Transferase(Phosphotransferase) domain 1 443 644 - -
Trre2g05518 697 Gene3D Phosphorylase Kinase; domain 1 330 442 - -
Trre2g05518 697 Gene3D - 26 132 IPR038408 -
Trre2g05518 697 Gene3D - 140 249 IPR038408 -
Trre2g05518 697 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Trre2g05518 697 ProSiteProfiles Gnk2-homologous domain profile. 138 249 IPR002902 -
Trre2g05518 697 MobiDBLite consensus disorder prediction 257 280 - -
Trre2g05518 697 FunFam Cysteine-rich receptor-like protein kinase 10 330 442 - -
Trre2g05518 697 Pfam Protein kinase domain 368 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05518 697 SUPERFAMILY Protein kinase-like (PK-like) 352 666 IPR011009 -
Trre2g05518 697 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Trre2g05518 697 CDD STKc_IRAK 373 638 - -
Trre2g05518 697 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 132 - -
Trre2g05518 697 SMART serkin_6 367 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05518 697 MobiDBLite consensus disorder prediction 262 279 - -
Trre2g05518 697 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Trre2g05518 697 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Trre2g05518 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05518 Trre-Chr2 61552184 61556455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05518 39 685 Receptor kinase-like Gene Family AT4G21410 44.277 1.22e-177 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g05518 Pkinase 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05518 - - tpra:123882259 956.436