Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05517 ATGCTTTCTTGGCAATGGACTCTGTTTTCACTTCTTCCTCTGTTTTTCACACTAAATTCTGAAGCAAACGACCAACTAGTTTTCCGCTACCATGCCTGTAACCAAAATCTCGGAAACTTCACCAAAGGTAGTGTCTACGAGAACAACCGCGACAATGTTTTGGAACAAATATATTCCAACAAAGAAATAAACTACGGTTTCTACAATTTCTCGTATGGCGAAGAACCTAACAGAGTAAACGCAATCGGTTTCTGCAGAGGCGATGTTAATCCAACCAATTGCCGTGAATGTTTGAGAACCTCCGCGGTACTTCTAACCGATCGATGTCCAATACAGAAAGAAGCAATTGGTTACTATGATTTGTGCACCTTACGTTATTCAAACGATTCTCTATTTGGCGTCATGAAAACCGAAACAGGTTTCGTTTATGATATCGAAACCAAGACAGTGGTGGATGATTTGTTTAATCAAACACTTAATGTCTTGTTGGATGAACTTAAAAGCGCGGCTGCAGATGGTGACTCGCAACATAAGTTTGCTGAAAAAAGTGTTAAAGTAATTGATGAAGCTAGTAGTAATAGAAATGAGACTATATATGGTTTGGTTCAGTGTACACCAGATTTGTCCAAGGAAAACTGTACTGAATGTTTGGATTCAGCTTTGGGACAGTTTCCATATTGGTGTAAACAAATGAAAGGTTGTTTGTATCTTGGACCAAGTTGTTCTGTTAGATATGATATCACTCCTTTCTTTCAGTCCATAGTCATGAACAATGCAGAATCACCAGCACCACAGCCAGCTTCTCAAGCAATTCCTCCTGCACTTTCTCCTAAAACTGCAACTTCTGCTATCTCCATCAACACATCTACTAGTAAAGGAAAGAGCAGGAAAATAAGAACGTCCATCGCTATCGTTGTAGCAATTGTTGTGGCTGGCATACTTTTGGTGGGTATATGGATTTGTTTGCGAAGGAGAAAACCAAAACCCGAACACACGCCAGAAATTGAAGGTGAAGAGAAAAATGAAGATGAAGATGAAGTTGATGTTGAAGAGGAAGAAGCTGAAGCTGGTAATGACCTTAAAGTTGGTGACTTGTTGCAATATGACTTTGCAACAATCAGATTAGCCACAAGCAACTTCTCTGATGTAAATAAGCTTGGTCAAGGTGGATTTGGATCTGTTTACAAGGGTACACTCTCTAACGGACATGATATTGCTATCAAAAGATTGGCTAACAATTCTGAGCAAGGAGAAATCGAATTCAAGAACGAAGTATTGCTAACGGGGAAACTTCAACATCGAAATTTAGTTAAACTACTAGGTTTCTGCTTACAAAGAAAAGAAAGACTACTAATATACGAGTTTGTCTCCAATAAAAGTCTTGATTATATCATATTCGATCCAATCAAGCGTGCAAGTCTAAACTGGGAAAGACGATCCAAAATCATAAAAGATATTGCTCGTGGTCTTCTTTATCTTCATGAAGATTCTCGATTACAAATTGTTCACCGTGATCTCAAAACAAGTAACATTCTACTAGATGAAGAGATGAACCCAAAAATTACGGATTTTGGCATTGCAAGATTGTTTGATCCAAATCAAACTCATGGCATGACAAAGACGGTCATCGGAACTTATGGATATATGGCACCAGAGTACATTAAACATGGACAATTCTCAATCAAATCAGATGTGTTCAGTTTTGGCGTAATCATTTTAGAAATTATTTGCGGCCAAAGAAACACTGAGATTCGAGATGGGGAGAATATAGAAGATCTATTAGGCATTGCATGGAAAAATTGGAAGGCAGGAACAAGTTTAGATATTGTAGATCCTATATTACACCAAGGATTTAATAAGAATGAAAAATTGAGATGCATCCAAGTTGGATTACTTTGTGTTCAAGAAGATATAGTTGTGAGACCAACTATGAGTTTGGTTTTACTAATGCTTAATAGCACCTCTTACCCACTTCCTGAACCTTTGGAACCTCCTTTTCTAATGCAACCCAAAAGGGCATTATCTATACACTTAAATGAGCAAGATTCAGATCCCACAAAGTCAAGTGATTCAGGATCAGGAAGTCAACCTACTCAAGGATCAACAAGTAAGTCCTCAGCTACAGATCAACAATAA 2136 0.3801 MLSWQWTLFSLLPLFFTLNSEANDQLVFRYHACNQNLGNFTKGSVYENNRDNVLEQIYSNKEINYGFYNFSYGEEPNRVNAIGFCRGDVNPTNCRECLRTSAVLLTDRCPIQKEAIGYYDLCTLRYSNDSLFGVMKTETGFVYDIETKTVVDDLFNQTLNVLLDELKSAAADGDSQHKFAEKSVKVIDEASSNRNETIYGLVQCTPDLSKENCTECLDSALGQFPYWCKQMKGCLYLGPSCSVRYDITPFFQSIVMNNAESPAPQPASQAIPPALSPKTATSAISINTSTSKGKSRKIRTSIAIVVAIVVAGILLVGIWICLRRRKPKPEHTPEIEGEEKNEDEDEVDVEEEEAEAGNDLKVGDLLQYDFATIRLATSNFSDVNKLGQGGFGSVYKGTLSNGHDIAIKRLANNSEQGEIEFKNEVLLTGKLQHRNLVKLLGFCLQRKERLLIYEFVSNKSLDYIIFDPIKRASLNWERRSKIIKDIARGLLYLHEDSRLQIVHRDLKTSNILLDEEMNPKITDFGIARLFDPNQTHGMTKTVIGTYGYMAPEYIKHGQFSIKSDVFSFGVIILEIICGQRNTEIRDGENIEDLLGIAWKNWKAGTSLDIVDPILHQGFNKNEKLRCIQVGLLCVQEDIVVRPTMSLVLLMLNSTSYPLPEPLEPPFLMQPKRALSIHLNEQDSDPTKSSDSGSGSQPTQGSTSKSSATDQQ 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05517 711 CDD STKc_IRAK 386 652 - -
Trre2g05517 711 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Trre2g05517 711 FunFam Cysteine-rich receptor-like protein kinase 10 140 250 - -
Trre2g05517 711 ProSiteProfiles Gnk2-homologous domain profile. 136 250 IPR002902 -
Trre2g05517 711 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
Trre2g05517 711 Gene3D Transferase(Phosphotransferase) domain 1 456 657 - -
Trre2g05517 711 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Trre2g05517 711 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 119 708 - -
Trre2g05517 711 Gene3D Phosphorylase Kinase; domain 1 342 455 - -
Trre2g05517 711 Gene3D - 143 250 IPR038408 -
Trre2g05517 711 Gene3D - 25 131 IPR038408 -
Trre2g05517 711 MobiDBLite consensus disorder prediction 679 711 - -
Trre2g05517 711 SMART serkin_6 380 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05517 711 FunFam cysteine-rich receptor-like protein kinase 10 456 658 - -
Trre2g05517 711 MobiDBLite consensus disorder prediction 329 355 - -
Trre2g05517 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Trre2g05517 711 FunFam Cysteine-rich receptor-like protein kinase 10 340 455 - -
Trre2g05517 711 Pfam Protein kinase domain 381 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05517 711 Coils Coil 335 355 - -
Trre2g05517 711 Pfam Salt stress response/antifungal 153 246 IPR002902 -
Trre2g05517 711 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Trre2g05517 711 MobiDBLite consensus disorder prediction 337 355 - -
Trre2g05517 711 ProSiteProfiles Protein kinase domain profile. 380 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05517 711 MobiDBLite consensus disorder prediction 673 711 - -
Trre2g05517 711 SUPERFAMILY Protein kinase-like (PK-like) 366 678 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05517 Trre-Chr2 61542110 61551293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05517 38 669 Receptor kinase-like Gene Family AT4G21410 45.383 2.06e-179 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g05517 Pkinase 8.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05517 - - tpra:123882259 1201.81