Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05513 | ATGTTGCGCTACTCCAACCGATCAATATTTGGCCTTATGGAACAATTTCCTTGGTTTTATAGTGCAAGCAAAAGTATAGAAAAAGAGGTGGATCTATTTAATCAAGTTCTTGGGAACTTGATGAAGAAACTGAAAGAAAAAGCAGCACCAAGTAATGACTCTCGTGTTAAGTATGCTACGGGTAATGAAACTGATGTGAAGTTGAATTTTCAAACCATATATGGTCTAGTGCAGTGTACACCTGATTTATCATCACAAGATTGCATGGATTGTTTAAATGGTGTTATCGCAGAAATTCCAACTTGTTGTAGTAACAAGTTAAGTGCTAGAATTATTGAACCAAGTTGTAATATTAGATATGATTCCTATCCCTTCTACAGTTCTCCGTTTGTAGTAGACCCAGATGAAACCTCTCGAGCTCGACCACAAGAAAAAAGCAAATCATCGCATACTAGTACTACCATTGCCATAGTTGTAGCAACTGCTGTTGTTGTTCTTGTTCTGCTAACTTTGATCATTTGCATATGCTTAAGGAGAAATCGCCGGCGCCATAGTATGGCAGGGTCAAATCTTGAAGAAATACAAGATGATGATGATGATGATGATGACGACGATGATGATATTGAAATCGCTGAGTCACTGCAATTCAACTTCGACAAAATAGGCGTTGCGACAGATAACTTTTCCGAAGCTAATAAACTCGGGCGTGGCAGATTTGGAGTTGTTTATCAGGGTAAACTCTCGAGTGGACAAGTGATTGCGGTCAAAAGGTTGTCAAAAGATTCTGGACAAGGAGATATTGAATTTAAAAATGAAGTGCTTTTATTGGCTAAGCTGCAGCATCGAAATTTAGTCAAACTACTTGGTTTTTGTCTAGAAAGAAAAGAAAGGCTACTTGTTTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTTATATTTGATCCAATAAAGAAAGTACAATTAGATTGGGAAAGGCGCTATAAAATTATTGGAGGTATTGCCAGAGGCCTTCTTTACCTTCACGAGGATTCTCGACTTCGTATTATACATCGTGATCTTAAAGCAAGTAACATTCTCTTGGACGAAGATATGAATGCTAAAATATCAGATTTTGGCATGGCCAGGCTATTGCTTGTTGATCAAACTCAAGTAAATACAGATAAAATCGTTGGAACATATGGATATATGGCTCCTGAGTATGCAATGTTTGGACAATTTACGGTAAAGTCAGATGTTTTTAGTTTTGACGTATTAGTTCTAGAGATCATAAGTGGCCAAAAAATTAGTCGCATTATTCAAGGGCAGAATCAGGAGGATTTACTTAGCTTTGCATGGAGAAACTGGAGGGAGGGTACAATTAGAAATATAATAGATCCATCATTAATCAACGGTTCACAAAATGAAATAATGAGATGCATTCACATTGGATTACTCTGTGTTCAAGAAAATTTGGTTGACAGACCAACTATGGCAAACATTGCACTGATGCTTAGTAGTTATTCTTTCACTATGCCTCTACCTTTGGAGCCTGCATATGCTATGGGTGGGAGAACTGGAAGCCTTACATACATGCAATCATCTGGGGAAGATATAGGAACAACAAGTTCATTTGAATCCAAAAGTAAATCAGTAAATGACAATACAATGTCTTAA | 1656 | 0.369 | MLRYSNRSIFGLMEQFPWFYSASKSIEKEVDLFNQVLGNLMKKLKEKAAPSNDSRVKYATGNETDVKLNFQTIYGLVQCTPDLSSQDCMDCLNGVIAEIPTCCSNKLSARIIEPSCNIRYDSYPFYSSPFVVDPDETSRARPQEKSKSSHTSTTIAIVVATAVVVLVLLTLIICICLRRNRRRHSMAGSNLEEIQDDDDDDDDDDDDIEIAESLQFNFDKIGVATDNFSEANKLGRGRFGVVYQGKLSSGQVIAVKRLSKDSGQGDIEFKNEVLLLAKLQHRNLVKLLGFCLERKERLLVYEFVPNKSLDYFIFDPIKKVQLDWERRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEDMNAKISDFGMARLLLVDQTQVNTDKIVGTYGYMAPEYAMFGQFTVKSDVFSFDVLVLEIISGQKISRIIQGQNQEDLLSFAWRNWREGTIRNIIDPSLINGSQNEIMRCIHIGLLCVQENLVDRPTMANIALMLSSYSFTMPLPLEPAYAMGGRTGSLTYMQSSGEDIGTTSSFESKSKSVNDNTMS | 551 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05513 | 551 | ProSiteProfiles | Protein kinase domain profile. | 228 | 504 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g05513 | 551 | Gene3D | Transferase(Phosphotransferase) domain 1 | 304 | 505 | - | - | |
Trre2g05513 | 551 | MobiDBLite | consensus disorder prediction | 530 | 551 | - | - | |
Trre2g05513 | 551 | CDD | STKc_IRAK | 234 | 498 | - | - | |
Trre2g05513 | 551 | SMART | serkin_6 | 228 | 502 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g05513 | 551 | ProSiteProfiles | Gnk2-homologous domain profile. | 15 | 125 | IPR002902 | - | |
Trre2g05513 | 551 | FunFam | cysteine-rich receptor-like protein kinase 10 | 304 | 505 | - | - | |
Trre2g05513 | 551 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 191 | 303 | - | - | |
Trre2g05513 | 551 | SUPERFAMILY | Protein kinase-like (PK-like) | 212 | 498 | IPR011009 | - | |
Trre2g05513 | 551 | ProSitePatterns | Protein kinases ATP-binding region signature. | 234 | 256 | IPR017441 | GO:0005524 | |
Trre2g05513 | 551 | Pfam | Salt stress response/antifungal | 28 | 123 | IPR002902 | - | |
Trre2g05513 | 551 | Gene3D | - | 19 | 125 | IPR038408 | - | |
Trre2g05513 | 551 | Gene3D | Phosphorylase Kinase; domain 1 | 194 | 303 | - | - | |
Trre2g05513 | 551 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 349 | 361 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g05513 | 551 | Pfam | Protein tyrosine and serine/threonine kinase | 231 | 495 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g05513 | 551 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 18 | 125 | - | - | |
Trre2g05513 | 551 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 36 | 548 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05513 | Trre-Chr2 | 61511464 | 61515590 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g05513 | 1 | 515 | Receptor kinase-like Gene Family | AT4G21410 | 51.705 | 0.0 | 525 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Trre2g05513 | PK_Tyr_Ser-Thr | 2.9e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05513 | - | - | gmx:100782800 | 657.521 |