Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05513 ATGTTGCGCTACTCCAACCGATCAATATTTGGCCTTATGGAACAATTTCCTTGGTTTTATAGTGCAAGCAAAAGTATAGAAAAAGAGGTGGATCTATTTAATCAAGTTCTTGGGAACTTGATGAAGAAACTGAAAGAAAAAGCAGCACCAAGTAATGACTCTCGTGTTAAGTATGCTACGGGTAATGAAACTGATGTGAAGTTGAATTTTCAAACCATATATGGTCTAGTGCAGTGTACACCTGATTTATCATCACAAGATTGCATGGATTGTTTAAATGGTGTTATCGCAGAAATTCCAACTTGTTGTAGTAACAAGTTAAGTGCTAGAATTATTGAACCAAGTTGTAATATTAGATATGATTCCTATCCCTTCTACAGTTCTCCGTTTGTAGTAGACCCAGATGAAACCTCTCGAGCTCGACCACAAGAAAAAAGCAAATCATCGCATACTAGTACTACCATTGCCATAGTTGTAGCAACTGCTGTTGTTGTTCTTGTTCTGCTAACTTTGATCATTTGCATATGCTTAAGGAGAAATCGCCGGCGCCATAGTATGGCAGGGTCAAATCTTGAAGAAATACAAGATGATGATGATGATGATGATGACGACGATGATGATATTGAAATCGCTGAGTCACTGCAATTCAACTTCGACAAAATAGGCGTTGCGACAGATAACTTTTCCGAAGCTAATAAACTCGGGCGTGGCAGATTTGGAGTTGTTTATCAGGGTAAACTCTCGAGTGGACAAGTGATTGCGGTCAAAAGGTTGTCAAAAGATTCTGGACAAGGAGATATTGAATTTAAAAATGAAGTGCTTTTATTGGCTAAGCTGCAGCATCGAAATTTAGTCAAACTACTTGGTTTTTGTCTAGAAAGAAAAGAAAGGCTACTTGTTTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTTATATTTGATCCAATAAAGAAAGTACAATTAGATTGGGAAAGGCGCTATAAAATTATTGGAGGTATTGCCAGAGGCCTTCTTTACCTTCACGAGGATTCTCGACTTCGTATTATACATCGTGATCTTAAAGCAAGTAACATTCTCTTGGACGAAGATATGAATGCTAAAATATCAGATTTTGGCATGGCCAGGCTATTGCTTGTTGATCAAACTCAAGTAAATACAGATAAAATCGTTGGAACATATGGATATATGGCTCCTGAGTATGCAATGTTTGGACAATTTACGGTAAAGTCAGATGTTTTTAGTTTTGACGTATTAGTTCTAGAGATCATAAGTGGCCAAAAAATTAGTCGCATTATTCAAGGGCAGAATCAGGAGGATTTACTTAGCTTTGCATGGAGAAACTGGAGGGAGGGTACAATTAGAAATATAATAGATCCATCATTAATCAACGGTTCACAAAATGAAATAATGAGATGCATTCACATTGGATTACTCTGTGTTCAAGAAAATTTGGTTGACAGACCAACTATGGCAAACATTGCACTGATGCTTAGTAGTTATTCTTTCACTATGCCTCTACCTTTGGAGCCTGCATATGCTATGGGTGGGAGAACTGGAAGCCTTACATACATGCAATCATCTGGGGAAGATATAGGAACAACAAGTTCATTTGAATCCAAAAGTAAATCAGTAAATGACAATACAATGTCTTAA 1656 0.369 MLRYSNRSIFGLMEQFPWFYSASKSIEKEVDLFNQVLGNLMKKLKEKAAPSNDSRVKYATGNETDVKLNFQTIYGLVQCTPDLSSQDCMDCLNGVIAEIPTCCSNKLSARIIEPSCNIRYDSYPFYSSPFVVDPDETSRARPQEKSKSSHTSTTIAIVVATAVVVLVLLTLIICICLRRNRRRHSMAGSNLEEIQDDDDDDDDDDDDIEIAESLQFNFDKIGVATDNFSEANKLGRGRFGVVYQGKLSSGQVIAVKRLSKDSGQGDIEFKNEVLLLAKLQHRNLVKLLGFCLERKERLLVYEFVPNKSLDYFIFDPIKKVQLDWERRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEDMNAKISDFGMARLLLVDQTQVNTDKIVGTYGYMAPEYAMFGQFTVKSDVFSFDVLVLEIISGQKISRIIQGQNQEDLLSFAWRNWREGTIRNIIDPSLINGSQNEIMRCIHIGLLCVQENLVDRPTMANIALMLSSYSFTMPLPLEPAYAMGGRTGSLTYMQSSGEDIGTTSSFESKSKSVNDNTMS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05513 551 ProSiteProfiles Protein kinase domain profile. 228 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05513 551 Gene3D Transferase(Phosphotransferase) domain 1 304 505 - -
Trre2g05513 551 MobiDBLite consensus disorder prediction 530 551 - -
Trre2g05513 551 CDD STKc_IRAK 234 498 - -
Trre2g05513 551 SMART serkin_6 228 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05513 551 ProSiteProfiles Gnk2-homologous domain profile. 15 125 IPR002902 -
Trre2g05513 551 FunFam cysteine-rich receptor-like protein kinase 10 304 505 - -
Trre2g05513 551 FunFam Cysteine-rich receptor-like protein kinase 10 191 303 - -
Trre2g05513 551 SUPERFAMILY Protein kinase-like (PK-like) 212 498 IPR011009 -
Trre2g05513 551 ProSitePatterns Protein kinases ATP-binding region signature. 234 256 IPR017441 GO:0005524
Trre2g05513 551 Pfam Salt stress response/antifungal 28 123 IPR002902 -
Trre2g05513 551 Gene3D - 19 125 IPR038408 -
Trre2g05513 551 Gene3D Phosphorylase Kinase; domain 1 194 303 - -
Trre2g05513 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Trre2g05513 551 Pfam Protein tyrosine and serine/threonine kinase 231 495 IPR001245 GO:0004672|GO:0006468
Trre2g05513 551 FunFam Cysteine-rich receptor-like protein kinase 10 18 125 - -
Trre2g05513 551 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05513 Trre-Chr2 61511464 61515590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05513 1 515 Receptor kinase-like Gene Family AT4G21410 51.705 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g05513 PK_Tyr_Ser-Thr 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05513 - - gmx:100782800 657.521