Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05511 ATGGCAATTGTGACTGTATCTTTCAAGTTATCATTTTCCTTTTTTTCTTTTCTCCTTCTTCTCATTATTACTATTGTATCTCAAGCTAAAGCCCAGCCAAATTTTTTGGACTACTTTTGTATAGACGATAATGGCAACTACACAGCCAATAGTAAATATCAACACAACCTCAACATCCTTTTGTCCAATCTCTCTACCAACACACAAATCAACTACGGTTTCTACAATTTCTCTTATGGCCAAAACACCGACAAAGTAAACGCCATTGGACTCTGTAGAGGAGATGTTAAACCTGATGATTGCCGCAATTGTCTAAACGATTCAAGAGTTCTTCTAACACGACTTTGTCCAAATCAAAAAGAAGCAATTGGTTGGTATGAGAATTGTATGTTGCGCTACTCAAACCGATCCATATTTGGCCTTATGGAACAATTTCCTTGGTTCTATAGAGCAAGCAAAGATATAGAAAAAGAGGTGGATCTATTTAATCGAGTTCTTGGGAACTTGATGAAGAAACTGAAAGAAAAAGCAGCATCAAGTAATGACTCTCGTGTTAAGTATGCTACCGGTAATGAAACTGATGTGAAGTTGAATTTCGAAACCATATATGGACTTGTGCAGTGTACACCTGACTTATCATCACAAGATTGCATGGATTGTTTAAATGGTGCTATCGCAGAAATTCCAACTTGTTGTAGTAACAAGTTAAGTGCTAGAGTTATTGAACCAAGTTGTTATATTAGATATGATTCCTATCCGTTCTACGGTCCTCCGCTTGTAGTAGGTCCTCCTCCACTTGTAGTAGACCAAGATCAAACCTCTCAACCACAAGAAAAAAGCAAATCATCTCATACTGCCATTGCCATAGTTGTGGTTACTGTTGTTGTAGTTCTTGTTATGCTAACTTTGATCATTTGCACATGCTTAAGGAGAAATCGCCATGGTATGGCAGAGTCAAATCTTGAAGAAATACAAAATGATGATGATAATGATGATGATGATGATGATATTGACATCGCCGAGTCATTGCAATTCAACTTTGACACAATAGGAGTTGCTACAGATAACTTTTCCGAAACTAATAAACTCGGGCGTGGCGGATTTGGAGTTGTTTATCAGGGTAAACTCTCGAGTGGACAAGTGATTGCGGTCAAAAGGTTGTCAAGAGATTCTGGACAAGGAGATATTGAATTTAAAAATGAAGTGCTTTTATTGGCCAAGCTTCAACATCGAAATTTAGTCAAACTACTTGGTTTTTGTCTAGAAAGAAAAGAAAGGCTACTTGTTTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTTATATTTGATCCAATAAAGAAAGCACAATTAGATTGGGAAAGGCGCTACAAAATCATTGGAGGTATTGCTAGAGGCCTTCTTTACCTTCACGAAGATTCTCGACTTCGTATTATACACCGTGATCTTAAAGCAAGTAACATTCTCTTGGACGAAAATATGGATGCTAAAATATCAGATTTTGGGATGGCCAGGCTATTGCTTGTTGATCAAACTCAAGTAAATACAGATAAAATCGTTGGAACATATGGATATATGGCTCCTGAGTATGCAATGTTTGGACAATTTACGGTAAAATCGGATGTTTTTAGTTTTGGCGTATTAGTTCTAGAAATTATAAGTGGCCAAAAAAGTAGTCGCATTCTTCAAGGGCAGAGTCAGGAGGATTTACTTAGCTTTACATGGAGAAACTGGAGGGAGGGTACAATCAGAAATATAATAGATCCATCATTAAACAATGGTTCACAAAATGAAATAATGAGATGCATTCACATTGGATTACTCTGTGTTCAAGAAAATTTGGTTGACAGACCAACTATGGCAAACATTGCACTCATGCTTAGTAGTTATTCTTTCACCATGCCTCTACCTTTGGAGCCTGCATCTTCCTTTGTTGGAAGAACTGGTAGCCTTACATACATGCAATCATCCGGGGAAGATAAAGGAACTGGTAGCCTTACAACAGGTTCACATGAATCCAAGAAAAGTAAATCAGTATATGAGAGTACAATGTCTTAA 2058 0.3703 MAIVTVSFKLSFSFFSFLLLLIITIVSQAKAQPNFLDYFCIDDNGNYTANSKYQHNLNILLSNLSTNTQINYGFYNFSYGQNTDKVNAIGLCRGDVKPDDCRNCLNDSRVLLTRLCPNQKEAIGWYENCMLRYSNRSIFGLMEQFPWFYRASKDIEKEVDLFNRVLGNLMKKLKEKAASSNDSRVKYATGNETDVKLNFETIYGLVQCTPDLSSQDCMDCLNGAIAEIPTCCSNKLSARVIEPSCYIRYDSYPFYGPPLVVGPPPLVVDQDQTSQPQEKSKSSHTAIAIVVVTVVVVLVMLTLIICTCLRRNRHGMAESNLEEIQNDDDNDDDDDDIDIAESLQFNFDTIGVATDNFSETNKLGRGGFGVVYQGKLSSGQVIAVKRLSRDSGQGDIEFKNEVLLLAKLQHRNLVKLLGFCLERKERLLVYEFVPNKSLDYFIFDPIKKAQLDWERRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDENMDAKISDFGMARLLLVDQTQVNTDKIVGTYGYMAPEYAMFGQFTVKSDVFSFGVLVLEIISGQKSSRILQGQSQEDLLSFTWRNWREGTIRNIIDPSLNNGSQNEIMRCIHIGLLCVQENLVDRPTMANIALMLSSYSFTMPLPLEPASSFVGRTGSLTYMQSSGEDKGTGSLTTGSHESKKSKSVYESTMS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05511 685 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Trre2g05511 685 SMART serkin_6 357 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05511 685 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 33 138 - -
Trre2g05511 685 FunFam Cysteine-rich receptor-like protein kinase 10 147 254 - -
Trre2g05511 685 ProSiteProfiles Protein kinase domain profile. 357 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05511 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Trre2g05511 685 SUPERFAMILY Protein kinase-like (PK-like) 341 627 IPR011009 -
Trre2g05511 685 CDD STKc_IRAK 363 627 - -
Trre2g05511 685 ProSiteProfiles Gnk2-homologous domain profile. 144 254 IPR002902 -
Trre2g05511 685 FunFam Cysteine-rich receptor-like protein kinase 10 319 432 - -
Trre2g05511 685 Gene3D Phosphorylase Kinase; domain 1 321 432 - -
Trre2g05511 685 Gene3D - 33 137 IPR038408 -
Trre2g05511 685 Gene3D - 150 254 IPR038408 -
Trre2g05511 685 Pfam Protein tyrosine and serine/threonine kinase 360 624 IPR001245 GO:0004672|GO:0006468
Trre2g05511 685 FunFam cysteine-rich receptor-like protein kinase 10 433 634 - -
Trre2g05511 685 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 676 - -
Trre2g05511 685 Gene3D Transferase(Phosphotransferase) domain 1 433 634 - -
Trre2g05511 685 ProSiteProfiles Gnk2-homologous domain profile. 35 138 IPR002902 -
Trre2g05511 685 Pfam Salt stress response/antifungal 159 252 IPR002902 -
Trre2g05511 685 Pfam Salt stress response/antifungal 40 135 IPR002902 -
Trre2g05511 685 MobiDBLite consensus disorder prediction 655 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05511 Trre-Chr2 61504545 61507632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05511 9 641 Receptor kinase-like Gene Family AT4G21410 50.464 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g05511 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05511 - - gmx:100791056 798.89