Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05509 ATGCCTTGTATAATGTTTCAAGAAATAGAAGATGATAATGATGATGATATTGGAATCGCTGAGTCACTGCAATTCAACTTCCACACAATAGGAGTTGCTACAGATAACTTTTCCGAAAGTAATAAACTCGGACATGGTGGATTTGGAATTGTTTATCGAGGAAAACTCTCGAATGGACTAGTGATTGCGGTCAAAAGTCTTGATTACTTTATATTTGATCCAATAAAGAAAGCACAATTAGATTGGGAAAGGCGCTACAAAATCATTGGAGATTTTGGGATGGCCAGGCTATTGCTTGTTGATCAAACTCAAGTAAATACAGATAAAATCGTCGGAACATATGGATATATGGCTCCTGAGTATGCAATGTTTGGACAATTTACGGTAAAATCGGATGTTTTTAGTTTTGGCGTATTAGTTCTAGAAATTATAAGTGGCCAAAAAAGTAGTCGCATTCTTCAAGGGCAGAGTCAGGAGGATTTACTTAGCTTTACATGGAGAAACTGGAGGGAGGGTACAATCAGAAATATAATAGATCCATCATTAAACAAATGCTCACAAAATGAAATAATGAGATGCATTCACATTGGTTTACTCTGTGTTCAAGAAAATTTGGTTGACAGACCAACTATGGCAAACATTGCACTCATGCTTAGTAGTTATTCTTTCATTATGCCTCTACCTTTGGAGCCTGCATCTTCCTTCGGCGGAAGAACTAGTAGCCTTACATACACGCAATCATCTGGGGAAGATAAAGGAACAACAGGTGTCCATACTTCATAG 783 0.3742 MPCIMFQEIEDDNDDDIGIAESLQFNFHTIGVATDNFSESNKLGHGGFGIVYRGKLSNGLVIAVKSLDYFIFDPIKKAQLDWERRYKIIGDFGMARLLLVDQTQVNTDKIVGTYGYMAPEYAMFGQFTVKSDVFSFGVLVLEIISGQKSSRILQGQSQEDLLSFTWRNWREGTIRNIIDPSLNKCSQNEIMRCIHIGLLCVQENLVDRPTMANIALMLSSYSFIMPLPLEPASSFGGRTSSLTYTQSSGEDKGTTGVHTS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05509 260 MobiDBLite consensus disorder prediction 240 260 - -
Trre2g05509 260 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 67 - -
Trre2g05509 260 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05509 260 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 98 223 - -
Trre2g05509 260 Pfam Protein tyrosine and serine/threonine kinase 88 215 IPR001245 GO:0004672|GO:0006468
Trre2g05509 260 Gene3D Transferase(Phosphotransferase) domain 1 81 223 - -
Trre2g05509 260 ProSitePatterns Protein kinases ATP-binding region signature. 43 65 IPR017441 GO:0005524
Trre2g05509 260 Gene3D Phosphorylase Kinase; domain 1 11 80 - -
Trre2g05509 260 SUPERFAMILY Protein kinase-like (PK-like) 25 241 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05509 Trre-Chr2 61491581 61493398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05509 13 231 Receptor kinase-like Gene Family AT4G23150 40.129 3.69e-72 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g05509 PK_Tyr_Ser-Thr 8.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05509 - - gmx:100791056 309.686