Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05497 ATGGCTTCCAACATCGAAGTACTAGTTTTCTTCCTCTTAACCCTTTTAATCATCTTCATCAATTCTTCAACTTCTTATGCACAAGACCCTAATTTTCTCTATCAAGTTTGTTCACCAAACAAATTCACATCAAACAGCACCTACCAAATAAACCTCAAAACCCTCTTATCTTCCTTATCATCTAAAGCAACCAATCAAAACACCTTATTCTTCAACAACACCATAGCCGAAAAAAATCATTCAGAAACAGTTTATGGACTATTCATGTGCAGGGGTGATATCCCTACCAACCTATGCTCATCATGCGTTGGAAACGCAACCAAAAGACTTTCCACAAACACAGAGTGCTCTGTTTCAGTTAGAGCAGTTATCTGGTATGATGAATGCATGGTTCGGTATTCCAACAACTCATTCTTTTCGACAGTGGCAGAAGGACCTGGCTATGTTCTCGCAAGTCCCACGAATATGACGAACCAAGATAGCTTCAACCGTTTGTTGTATGATACGTTGAACAAAACTGCAGATGAAGCTGCTACTAATTCTTTGAAGAAATTTGCTACGAGAGAAGAGAAAATATCTATATTTCAGAATCTTTATTGTTTAGCTCAGTGTACACCTGATATTGATGAAAGAGAGTGTAGAAGTTGTCTTTATAGTTTGATAAATTCGAATCTTCCAAGGTGTTGTGCAGGAACGCAAGGTGGAAGAGTTTTATATCCTAATTGTGTTATCAGGTTTGAAATTTATCCTTTCTATCGTTCTCTTACTGCTCCAACGCCAGCTCCTGCAGGACTCGTTCCATCTGCTAATTCGGCAGAAAATAAAAAAGGAAGATCACGAACAGCTATAATTGTTACATCTATTGTGGTTTCGGCAATAGTCTTTGCTATTTGCTTCTATTATCTAAGGAGAAAAGTGAGAAAAAGAAATTCGAATATTCTCCTCCAAGAAAACTTTGGTGATGAGATTACCACTTTAGAGGGGTTGCAATTCGATTTAGCTACTATTGCTACAGCAACAAACAATTTCTCACATGAGAACAAGATTGGAAAAGGTGGATTTGGAGAAGTTTACAAGGGCACTCTTCGTGATGGGAGAGATATAGCTGTGAAGAGGCTTTCAACAAGTTCCACACAAGGTTCAATTGAGTTCAAGAATGAGATTTTATTGATAGCCAAGCTACAACATAGAAACCTTGTGGCCTTGATAGGTTTTTGTCTAGAAGAGCAAGAGAAGATTCTCATTTACGAATATGTCCCAAATGGAAGTCTTGATTATTTTCTATTCGGGGGCCAACAACAAAAGTTAAGCTGGTTCGAGCGCTACAAAATTATAGAAGGAACTGCATTAGGAGTTCTATATTTACATGAGTATTCTCGATTTAAAGTGATACACCGTGATCTCAAACCTAGTAATATTTTATTAGATGAACATATGAATCCTAAAATCTCGGATTTTGGCATGGCTAGAATTGTTGACATTGACCAAGATCGTGGTAACACTAGCAGAATTGTGGGAACATATGGTTATATGTCTCCGGAATATGCTATGCTTGGAAAATTCTCTGAAAAATCAGATGTTTTCAGTTTTGGAGTAATGATTATCGAGATAATCACCGGAAAAAAGAATGCAAACTCTTACGAATCAAATCAAAATGCTAAAGGCCTCTTAAGCTATGTTTGGAGACAATGGAATGATGAAACATTGTTGACTGCAATTGACCCAAGTATTAAAGAAAAATATTCTCAAATAGAAGTTATAAAATGCATTCAAATTGGCTTATTATGTGTTCAAGAAAATCCAAATGCTAGACCTACAATGTCAACAGTTGTTTCATATCTTACTAGGCACTCACCACTTGAACTGCCATCTCCACAAGAACCATCATTTGTGTTGCATGGTGGTGGAAGTGGAATGGATAAAAATATTGTTGCGCAGCAAGAGTCTAGCTCAGGTCTATCTGGTAGTAGTTCTAATCCATTTTCAGTTAATGACATGTCAATCAGTACATTTTATCCTCGTTAG 2025 0.3699 MASNIEVLVFFLLTLLIIFINSSTSYAQDPNFLYQVCSPNKFTSNSTYQINLKTLLSSLSSKATNQNTLFFNNTIAEKNHSETVYGLFMCRGDIPTNLCSSCVGNATKRLSTNTECSVSVRAVIWYDECMVRYSNNSFFSTVAEGPGYVLASPTNMTNQDSFNRLLYDTLNKTADEAATNSLKKFATREEKISIFQNLYCLAQCTPDIDERECRSCLYSLINSNLPRCCAGTQGGRVLYPNCVIRFEIYPFYRSLTAPTPAPAGLVPSANSAENKKGRSRTAIIVTSIVVSAIVFAICFYYLRRKVRKRNSNILLQENFGDEITTLEGLQFDLATIATATNNFSHENKIGKGGFGEVYKGTLRDGRDIAVKRLSTSSTQGSIEFKNEILLIAKLQHRNLVALIGFCLEEQEKILIYEYVPNGSLDYFLFGGQQQKLSWFERYKIIEGTALGVLYLHEYSRFKVIHRDLKPSNILLDEHMNPKISDFGMARIVDIDQDRGNTSRIVGTYGYMSPEYAMLGKFSEKSDVFSFGVMIIEIITGKKNANSYESNQNAKGLLSYVWRQWNDETLLTAIDPSIKEKYSQIEVIKCIQIGLLCVQENPNARPTMSTVVSYLTRHSPLELPSPQEPSFVLHGGGSGMDKNIVAQQESSSGLSGSSSNPFSVNDMSISTFYPR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05497 674 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Trre2g05497 674 ProSiteProfiles Gnk2-homologous domain profile. 30 138 IPR002902 -
Trre2g05497 674 FunFam cysteine-rich receptor-like protein kinase 10 419 620 - -
Trre2g05497 674 Gene3D Phosphorylase Kinase; domain 1 305 418 - -
Trre2g05497 674 Gene3D - 29 138 IPR038408 -
Trre2g05497 674 Gene3D - 148 251 IPR038408 -
Trre2g05497 674 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Trre2g05497 674 SUPERFAMILY Protein kinase-like (PK-like) 330 630 IPR011009 -
Trre2g05497 674 CDD STKc_IRAK 349 616 - -
Trre2g05497 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Trre2g05497 674 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 303 418 - -
Trre2g05497 674 Gene3D Transferase(Phosphotransferase) domain 1 419 621 - -
Trre2g05497 674 FunFam Cysteine-rich receptor-like protein kinase 25 146 251 - -
Trre2g05497 674 ProSiteProfiles Protein kinase domain profile. 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05497 674 Pfam Salt stress response/antifungal 37 135 IPR002902 -
Trre2g05497 674 Pfam Salt stress response/antifungal 154 248 IPR002902 -
Trre2g05497 674 SMART serkin_6 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05497 674 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 670 - -
Trre2g05497 674 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 30 137 - -
Trre2g05497 674 Pfam Protein kinase domain 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05497 Trre-Chr2 61418939 61424322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05497 1 674 Receptor kinase-like Gene Family AT4G05200 45.821 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g05497 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05497 - - vun:114191422 883.248