Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05496 ATGGCCGTAATTAGAACAGCAACAGACAACTTTTCACATCAAAACAAGATTGGCGAAGGTGGATTTGGAGAAGTTTACAAGGGCATTCTTTCTGATGGACGACACGTAGCTGTTAAGAGGCTTTCATCAAGTTCAAAGCAAGGCATCATCGAGTTCAAGAATGAAATTTTATTGATAGCCAAGTTACAGCAAAGAAATCTTGTGGTATTAATAGGTTTCTGCATAGAAGAGCAAGAGAAGATTCTTATTTATGAATATGTGCCAAATGGGAGCCTTGATTACTTTTTATTTGATACTCAACAACAGAAGTTAACCTGGGATGAACGTTACAAAATTATAGGAGGGACGGCGTTAGGAATTCTTTATTTACATGAATATTCTCGTCTCAAAGTTATACATCGTGATCTTAAACCTAGTAATGTTTTATTAGATGAAAATATGAATCCTAAAATATCAGATTTTGGCATGGCTAGAATTGTTCAAATAGATCAAGATCAAGGACATACAAACAAAATTGCTGGAACATGGGGTTACATGTCCCCAGAGTATGCAATGCTTGGACAATTTTCGGAGAAATCGGATGTTTTTAGTTTTGGTGTCATTGTTTTAGAGATTATTACAGGAAAAAGAAATATAAATCCTTATGAATCACATCATGTTACTGAAGGCCTTACAAGTTATGTATGGAGACAATGGAAAAATGAAACTCCATTAATCATATTGGATCCAAAGTTTGAAAATTATTCTCGTATTGAAGTTATTAAGTGTATACATATTGGTTTGTTATGTGTTCAAGAAAATCCAAATGTCAGACCTACGATGGCAATGGTTGTTTCATATCTCAATAGTCATTCACCAGAATTGCCATCTCCACAAGAACCAGCATTTTTCATACAACATAGAATGAATGAAGAAGTAACAGCACAAATGGAACCAAGTTCTGCCAATAATTTTATATCATTATCAGTGAACCATATGTCTATAAGTGAATTTTATCCTCAAAGGTAG 1008 0.3403 MAVIRTATDNFSHQNKIGEGGFGEVYKGILSDGRHVAVKRLSSSSKQGIIEFKNEILLIAKLQQRNLVVLIGFCIEEQEKILIYEYVPNGSLDYFLFDTQQQKLTWDERYKIIGGTALGILYLHEYSRLKVIHRDLKPSNVLLDENMNPKISDFGMARIVQIDQDQGHTNKIAGTWGYMSPEYAMLGQFSEKSDVFSFGVIVLEIITGKRNINPYESHHVTEGLTSYVWRQWKNETPLIILDPKFENYSRIEVIKCIHIGLLCVQENPNVRPTMAMVVSYLNSHSPELPSPQEPAFFIQHRMNEEVTAQMEPSSANNFISLSVNHMSISEFYPQR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05496 335 ProSitePatterns Protein kinases ATP-binding region signature. 17 39 IPR017441 GO:0005524
Trre2g05496 335 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 330 - -
Trre2g05496 335 Pfam Protein tyrosine and serine/threonine kinase 13 280 IPR001245 GO:0004672|GO:0006468
Trre2g05496 335 FunFam Cysteine-rich receptor-like protein kinase 10 1 86 - -
Trre2g05496 335 SUPERFAMILY Protein kinase-like (PK-like) 4 311 IPR011009 -
Trre2g05496 335 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Trre2g05496 335 FunFam cysteine-rich receptor-like protein kinase 10 87 288 - -
Trre2g05496 335 ProSiteProfiles Protein kinase domain profile. 11 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05496 335 CDD STKc_IRAK 17 282 - -
Trre2g05496 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Trre2g05496 335 SMART serkin_6 11 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05496 335 PIRSF ILK 3 293 - -
Trre2g05496 335 Gene3D Transferase(Phosphotransferase) domain 1 87 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05496 Trre-Chr2 61412036 61414251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05496 3 334 Receptor kinase-like Gene Family AT4G11530 55.689 7.16e-128 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g05496 PK_Tyr_Ser-Thr 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05496 - - mtr:25485260 601.282