Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05495 ATGCACGGATACTTTTCTGTAAAATCTGATGTGTATAGTTTCGGAATCATGGTTCTAGAGACTATTAGTGGAAAGAGGAAAGGTTGTTCTGCTGAATTAGAGCGTGTTGATGATATCCGGAGATATGTGAGTACAAAATGGGCAGAGCAAACACCACTTGAACTATTGGATCCTAATATTGAAGGAAGTTATTCCCAAGAAGAAGTCATCAAGTACATCCACATTGGTTTGTTATGTGTCCAGGAAAATCCAGATGACAGACCTACAATGGCAACAATTGCATTCTACCTCAACAGCCCTTCAATCAACTTGCCATCCCCTCTTGAACCACCGTATTTTAAGTGTAGTGGAATTGAAGAAAACATGGTCTTCAACAATGCATTGGATAGTAATAGTACCAGTGACTCAATCAACGGACTCTCTGTTACTAAGTTCTTTCCTCGTTAA 447 0.3937 MHGYFSVKSDVYSFGIMVLETISGKRKGCSAELERVDDIRRYVSTKWAEQTPLELLDPNIEGSYSQEEVIKYIHIGLLCVQENPDDRPTMATIAFYLNSPSINLPSPLEPPYFKCSGIEENMVFNNALDSNSTSDSINGLSVTKFFPR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05495 148 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
Trre2g05495 148 Pfam Protein tyrosine and serine/threonine kinase 3 94 IPR001245 GO:0004672|GO:0006468
Trre2g05495 148 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 143 - -
Trre2g05495 148 SUPERFAMILY Protein kinase-like (PK-like) 2 115 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05495 Trre-Chr2 61407449 61407895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05495 1 148 Receptor kinase-like Gene Family AT4G23140 38.926 3.10e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g05495 PK_Tyr_Ser-Thr 2.8e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05495 - - gmx:100793219 214.542