Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05447 ATGGCTTCCACAAAACACATCGTCTCTGAAATTCCTACCTATATCACACTCTACAGCGACGGCACCGTCGATCGTCCACGACAAGCACCACTAGTCCCACCTAATCTCGACGACCCAAATATCCCAGTCTCATCCAAAGACATCATCATCTCTCAAAACCCCAATATCTCTGCTCGTCTCTATCTCCCCAAAAACCCCACAGAAAAACTACCCATCTTAGTCTTCTTCCATGGCGGTGGATTCTTCTTCGAATCAGCTTTCTCTAAACTCTACCATGAACACTTCAACGTCTTTGTTTCACAAGCAAATTCAATCGTTGTTTCTGTTGAATACAGACTCGCTCCAGAACACCCTCTACCTGCTTGTTATAATGATTGTTGGAATGCACTCCAATGGGTTGCTTCTAATTCTTCCCAAAACCCCATCAACCCAGAACCGTGGTTAATTAACCACGGTGATTTCAACAGAGTTTTCATTGGTGGTGACAGTGCTGGTGGTAACATAGTTCATAACGTTGCTATTCGAGCTGGTTCTGAATCTTTACCTAATGATGTTAAACTATTAGGTGCTATTTTACAACACCCTTATTTCTATAGTTCATACCCTGTTGGATCAGAAAGTGTTAAACTCAACAGTTCTCAACTTGATTTGTTTACTTCGGTTTGGAGTTTTGTGTATCCATCAGCACCTGGTGGAATTGATAATCCTATGGTTAATCCTTTGGGTACAGGGGCACCAAGTTTGGAAGGAATTGGTTGTGATAGAATGATTGTTTGTGTTGCTGGGAAAGATGGAATTAGGGAGAGAGGGGTTTGGTATTATGAGATTGTGAAAAAGAGTGGTTGGAAAGGGAAATTGGAATTGTTTGAAGAAAAAGATGAAGATCATGTTTATCATATTTTTCATCCTGAATCTGAGAATGGTCAGAAACTGATTAAACGTTTGGCTTCCTATCTTCATGAGTAA 966 0.4079 MASTKHIVSEIPTYITLYSDGTVDRPRQAPLVPPNLDDPNIPVSSKDIIISQNPNISARLYLPKNPTEKLPILVFFHGGGFFFESAFSKLYHEHFNVFVSQANSIVVSVEYRLAPEHPLPACYNDCWNALQWVASNSSQNPINPEPWLINHGDFNRVFIGGDSAGGNIVHNVAIRAGSESLPNDVKLLGAILQHPYFYSSYPVGSESVKLNSSQLDLFTSVWSFVYPSAPGGIDNPMVNPLGTGAPSLEGIGCDRMIVCVAGKDGIRERGVWYYEIVKKSGWKGKLELFEEKDEDHVYHIFHPESENGQKLIKRLASYLHE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05447 321 PANTHER ARYLACETAMIDE DEACETYLASE 11 305 - -
Trre2g05447 321 Gene3D alpha/beta hydrolase 3 320 IPR029058 -
Trre2g05447 321 Pfam alpha/beta hydrolase fold 73 299 IPR013094 GO:0016787
Trre2g05447 321 SUPERFAMILY alpha/beta-Hydrolases 19 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05447 Trre-Chr2 61098616 61099581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05447 17 321 Carbohydrate Esterase AT1G19190 41.026 1.25e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05447 - K13258 mtr:25485225 570.852