Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05399 ATGGAACCGAGTGCGAGAATAGCTAGCCCTTCTGGGGTTGTGGTTAAGAATAGAAGTTCTTCAGGGTGTTTGATTGTTAGAAAGAAAGGGGATGGTTTGGGTGATGGAGTTGGTGGCGGTTCGAGTTCCCGGAAGCAGTATGAATCGAAGAAGGTGAGGAAAAAGCCGAAGGCAGATTCTAGTGATTCGGAATCAAGCGGGGAGTTACGTATGCCGTCTGCTAGGAGGATTGGCCCTGAGACCATTCGAGTTTGTAATAGTTTGAGTGCTCTTGAGCGAGGTGGTAATGTTGGTAGTGGCGAAATAAGTAGGAAGAGGGAGAGAATGGAGCAAATTAGGCGTAATGGGGATGGCATGGTTGAGGGGAATGGCTTGGAGAGAAGGGATAAAAAAATTAAGTTAGATGTGTTTGATTTTGATGAATACGATGGAGTGGGTGTGGAAAGGATGAGAAGGAGGCAATTTGATAATGATGGGGTTGGTTTAGGAGGAGGAAGGTTTACGGGAACAATGCATTCTGGTAGAGGTAGCATTGACAGGGAATTTGAAACTGGTTCAAGCAAACGCATTGTGGATAAGAGAAAAAATTCCTATTATGACAAGGCAAGTGGTTTGCATCTTGGAGATAGTGCTGACCATAGTCGGATAAAGATGAAAAAGGATGGAACTCAGCGTCCTCTGCCCTTGATGAAGGAGAAGTTTAACTCTGACGAGTCCATTAGGGTTCAGGGGAAAAATGGTGTTTTGAAGGTGATGGTTAATAAGAAGAAGGTGGGTGGGTCAGCAGAACACTATGATCATCGCAAATCAGTAGAAAGCAGACAAAGTTTAAGGGCCGAGGGCACCTCTAAGAGGAATGTTCCAATCCGCCCTTCATCACACTTAGAAACAAAATCTGCTGAGAAACAGGGTTTACTTGTTAGGCCAGAGAAGAAACAGATAACAAAAAAATCCTTGTCAAGTAAGGAGGACAGTAAGGGTGATGAACAGGATTCTGATAACAATGACACATCAATGAATCTAGAAGTAAAAAATATTAAAGCTCACACATCTTCAAAAAAGATAACCTCTGAAAATGAACAGACTCCCGTACATGACAAGCTCCCAACTACAAAATCGAGTGAAGGGAAAATCAGGTGA 1140 0.4325 MEPSARIASPSGVVVKNRSSSGCLIVRKKGDGLGDGVGGGSSSRKQYESKKVRKKPKADSSDSESSGELRMPSARRIGPETIRVCNSLSALERGGNVGSGEISRKRERMEQIRRNGDGMVEGNGLERRDKKIKLDVFDFDEYDGVGVERMRRRQFDNDGVGLGGGRFTGTMHSGRGSIDREFETGSSKRIVDKRKNSYYDKASGLHLGDSADHSRIKMKKDGTQRPLPLMKEKFNSDESIRVQGKNGVLKVMVNKKKVGGSAEHYDHRKSVESRQSLRAEGTSKRNVPIRPSSHLETKSAEKQGLLVRPEKKQITKKSLSSKEDSKGDEQDSDNNDTSMNLEVKNIKAHTSSKKITSENEQTPVHDKLPTTKSSEGKIR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05399 379 MobiDBLite consensus disorder prediction 93 124 - -
Trre2g05399 379 MobiDBLite consensus disorder prediction 355 369 - -
Trre2g05399 379 MobiDBLite consensus disorder prediction 1 81 - -
Trre2g05399 379 MobiDBLite consensus disorder prediction 201 225 - -
Trre2g05399 379 MobiDBLite consensus disorder prediction 99 124 - -
Trre2g05399 379 MobiDBLite consensus disorder prediction 156 187 - -
Trre2g05399 379 MobiDBLite consensus disorder prediction 295 333 - -
Trre2g05399 379 MobiDBLite consensus disorder prediction 257 279 - -
Trre2g05399 379 MobiDBLite consensus disorder prediction 257 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05399 Trre-Chr2 60684556 60685695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05399 12 379 PHD Transcription Factor Family AT4G14920 33.943 2.24e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05399 - - mtr:25485216 609.757