Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05388 ATGCTTATGACCAAGGAATTTGGAATTAACATCAGCGAGAAGCTAGCTTCTGTCGAAGCTCGAATTCTTCCCGCTCCTTGGCTTAAATATGACGAAAGTGGGAAAGAAAAGAATTGTTTACCCCATGTTGGTCAGTGGAATATGATGAATAAGGTTTGCTGCTGGACTGGGCGAAATTCTACAGGCCCAATAAGAGAAAGGCCCAATCCACGATCCAATAGTTCAAATAGCATCTTTGGCGGGAAAGCAAGGCGCGGCGTCTGTGGCGGAATAGCAAGACGCGGCGTTGGAAGATTACCACGCCCTCGGGCGCGATCCACCCACATGAAGAATAAAGTAACCACCCACTTACTCCACGTGGCTCGGCGGAAACCACCCACTACTGCCACAACGGCAACCCCAAAAGGCGGAGCACCACCCATAACCACCCAAAAATACGACGGAGACGGTGGAAAACCACCCACGATCTCCCTGAAGAGGAGTGGGGGTGACTTTTAG 498 0.506 MLMTKEFGINISEKLASVEARILPAPWLKYDESGKEKNCLPHVGQWNMMNKVCCWTGRNSTGPIRERPNPRSNSSNSIFGGKARRGVCGGIARRGVGRLPRPRARSTHMKNKVTTHLLHVARRKPPTTATTATPKGGAPPITTQKYDGDGGKPPTISLKRSGGDF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05388 165 MobiDBLite consensus disorder prediction 61 84 - -
Trre2g05388 165 Pfam Argonaute linker 2 domain 4 30 IPR032472 -
Trre2g05388 165 MobiDBLite consensus disorder prediction 61 80 - -
Trre2g05388 165 MobiDBLite consensus disorder prediction 123 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05388 Trre-Chr2 60567181 60567963 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05388 5 51 Eukaryotic Initiation Factors Gene Family AT5G43810 89.362 4.71e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05388 K11593 - nnu:104598676 95.9005