Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05384 ATGGCTACTGCCACCGCCTTGCTCCGCTCTTTCCGCCGCCGAGATGTTGCTTCTGCTTCCATCTCTGCTTATCATTCGTTGACGACGGGCAGCATTAAGCCTGCATATGTAGCTCACAGATGGTCAAGTTTGTGTCGACCATTCAGTTCAAGGCCTGCTGGAAATGATGTCATTGGTATTGATTTGGGTACAACAGTTGTTTTGGGTACAACAAATCCAAAAGTCATTGAGAATTCTGAAGGTGCACAAACTACACCATCTGTGCTTGCCTTCAACCAGAAAGGGGAGATGCTGGTAGGCATACCAGCCAAGCGTCAGCATGTAGCTAACCCAACAAATTACTCTCTCTGGAACCAAGCGTTGGATTGGTAG 372 0.4785 MATATALLRSFRRRDVASASISAYHSLTTGSIKPAYVAHRWSSLCRPFSSRPAGNDVIGIDLGTTVVLGTTNPKVIENSEGAQTTPSVLAFNQKGEMLVGIPAKRQHVANPTNYSLWNQALDW 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05384 123 FunFam heat shock 70 kDa protein-like 52 120 - -
Trre2g05384 123 Pfam Hsp70 protein 57 113 IPR013126 GO:0005524|GO:0140662
Trre2g05384 123 SUPERFAMILY Actin-like ATPase domain 57 115 IPR043129 -
Trre2g05384 123 Gene3D - 47 120 - -
Trre2g05384 123 PRINTS 70kDa heat shock protein signature 56 69 - -
Trre2g05384 123 PRINTS 70kDa heat shock protein signature 103 111 - -
Trre2g05384 123 PRINTS 70kDa heat shock protein signature 80 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05384 Trre-Chr2 60541452 60543000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05384 58 113 Calmodulin-binding Proteins AT3G12580 46.667 3.48e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05384 K04043 - gmx:100814039 167.162