Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05384 | ATGGCTACTGCCACCGCCTTGCTCCGCTCTTTCCGCCGCCGAGATGTTGCTTCTGCTTCCATCTCTGCTTATCATTCGTTGACGACGGGCAGCATTAAGCCTGCATATGTAGCTCACAGATGGTCAAGTTTGTGTCGACCATTCAGTTCAAGGCCTGCTGGAAATGATGTCATTGGTATTGATTTGGGTACAACAGTTGTTTTGGGTACAACAAATCCAAAAGTCATTGAGAATTCTGAAGGTGCACAAACTACACCATCTGTGCTTGCCTTCAACCAGAAAGGGGAGATGCTGGTAGGCATACCAGCCAAGCGTCAGCATGTAGCTAACCCAACAAATTACTCTCTCTGGAACCAAGCGTTGGATTGGTAG | 372 | 0.4785 | MATATALLRSFRRRDVASASISAYHSLTTGSIKPAYVAHRWSSLCRPFSSRPAGNDVIGIDLGTTVVLGTTNPKVIENSEGAQTTPSVLAFNQKGEMLVGIPAKRQHVANPTNYSLWNQALDW | 123 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05384 | 123 | FunFam | heat shock 70 kDa protein-like | 52 | 120 | - | - | |
Trre2g05384 | 123 | Pfam | Hsp70 protein | 57 | 113 | IPR013126 | GO:0005524|GO:0140662 | |
Trre2g05384 | 123 | SUPERFAMILY | Actin-like ATPase domain | 57 | 115 | IPR043129 | - | |
Trre2g05384 | 123 | Gene3D | - | 47 | 120 | - | - | |
Trre2g05384 | 123 | PRINTS | 70kDa heat shock protein signature | 56 | 69 | - | - | |
Trre2g05384 | 123 | PRINTS | 70kDa heat shock protein signature | 103 | 111 | - | - | |
Trre2g05384 | 123 | PRINTS | 70kDa heat shock protein signature | 80 | 92 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05384 | Trre-Chr2 | 60541452 | 60543000 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g05384 | 58 | 113 | Calmodulin-binding Proteins | AT3G12580 | 46.667 | 3.48e-07 | 45.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05384 | K04043 | - | gmx:100814039 | 167.162 |