Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05382 ATGGTTTCCGACAACAAAATGCTCGGAGAATTTGAGCTGCTTGGCATTCCTCCATCACCCAGAGGTATGCCTCAGATTGAGGTCACCTTTGACATTGATGCTAGTGGTATTGTTACTATGTCTGCCAAAGATAAGTCCACTAGTAAAGAGCAACAAATCACGATTAGGTCGTCTGGTGGTCTCTCAGATGATGAGATTGAGAAGATGGTCAAAGAAGCCGAGTTACATGCTCAAAAAGACCAAGAAAGAAAGTCTCTTATTAATATTAGGAATAATGCAGATACTAGCGTCTACAGCATTGAGAAGAGCTTAGGCGAATATAGAGACAAAATACCCAATGAAGTGGTAAAAGAGATCGAGGATGCAGTTTCAAATTTGAGAAGTGCGATGTTAAGAGATAATGCTGATGAAATAAAATCAAAGCTTGATGTTGCAAACAAAGTTGTGTCTAAGATTGGAGAGCACATGTCAGGTGGTGGTTCTCAGGGTGGAGACGAGGCTCCTGAGGCAGAATACGTGAAAAATTGA 528 0.411 MVSDNKMLGEFELLGIPPSPRGMPQIEVTFDIDASGIVTMSAKDKSTSKEQQITIRSSGGLSDDEIEKMVKEAELHAQKDQERKSLINIRNNADTSVYSIEKSLGEYRDKIPNEVVKEIEDAVSNLRSAMLRDNADEIKSKLDVANKVVSKIGEHMSGGGSQGGDEAPEAEYVKN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05382 175 MobiDBLite consensus disorder prediction 153 175 - -
Trre2g05382 175 Gene3D - 61 158 IPR029048 -
Trre2g05382 175 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 94 IPR029047 -
Trre2g05382 175 FunFam Molecular chaperone DnaK 61 161 - -
Trre2g05382 175 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 60 IPR029047 -
Trre2g05382 175 PANTHER HEAT SHOCK PROTEIN 70KDA 1 122 IPR013126 GO:0005524|GO:0140662
Trre2g05382 175 Pfam Hsp70 protein 1 156 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05382 Trre-Chr2 60539568 60540095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05382 4 159 Calmodulin-binding Proteins AT1G56410 40.994 5.03e-30 113