Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05363 | ATGTTCCTAAATTCTACTGCCCCTTTAAGTATTGTTCTTCAATGTTCCTTGATGAGAATGAAGGAGAAAAACATAATATTATCAGGGAATCTTAGTGCCCTTTTTGTCAGACTGTTTTGTGCAAGGTGTCATGTTCCTTGGCATCATGGGGTTGCTTGCGAGGGGTTTCAGAAATTGAATGTGGATGAAGATCTTCTTCTTAGTGAGCTTGCTAATCAGAAAAAATGGGAAATAAGTCTCAAATGCAAGTTCTATATTCAAATATACGACGATTGTTTTCATATGACCTGTAGGTGCTTATGTGAGTTTTGCTATCTTTGTGGAGAGGAATGGACACGTAATCACCCAGGGCTGTGTTAG | 360 | 0.3861 | MFLNSTAPLSIVLQCSLMRMKEKNIILSGNLSALFVRLFCARCHVPWHHGVACEGFQKLNVDEDLLLSELANQKKWEISLKCKFYIQIYDDCFHMTCRCLCEFCYLCGEEWTRNHPGLC | 119 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05363 | 119 | SUPERFAMILY | RING/U-box | 63 | 117 | - | - | |
Trre2g05363 | 119 | Pfam | IBR domain, a half RING-finger domain | 73 | 117 | IPR002867 | GO:0008270 | |
Trre2g05363 | 119 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 37 | 111 | IPR031127 | GO:0004842|GO:0016567 | |
Trre2g05363 | 119 | Gene3D | - | 51 | 119 | - | - | |
Trre2g05363 | 119 | ProSiteProfiles | TRIAD supradomain profile. | 1 | 119 | IPR044066 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05363 | Trre-Chr2 | 60404886 | 60405398 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g05363 | 39 | 108 | C3H Transcription Factor Family | AT2G19610 | 41.333 | 2.54e-10 | 54.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05363 | K11975 | - | cit:102618889 | 116.316 |