Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05355 ATGAATCCTTCAGTTGATGAACTTAAACAGTTTGAATTAGAAGAACAGGGAGAACCCGATGTTCCCGGTGACATTGATGGATGCAAAGCTGGGAATCAGAAGTGCAGCAGCTTGGTTTTGGAAAAAGAATATCCATCTGTCATGCCGTGTGATTTCTGTTGTGCTGAGCCTAAATTTTGCCGTGAATGTTGCTGCATTCTTTGTTACAAAGCCGTTGATTCAAGTCATGGTGGCTATAGCTATATTATGTGCAAAGTAAAACACGATGATGCTATTTGTGGGCATGTCGCTCATCTGGAATGTGCTTTTCGAGCTTACACGGCCGGCACCTTGGGGGGAATGATAGGATTGGATGCTGAATATTTTTGCCGGCGCTGTAATGGGAGGACTGAACTGATTTCTCATGTTTATAAGCTTCTACTGACAAGCGAAACTATTGATTCAGATGATGTGAAAGAAAAAATGTTAAATCTTGGCATTAATCTCTTACACGGTTCAGAGAAAGTCGCAGCAAAGGAGATTATGAGTCGAATTGCATTGGCCATGTCAAAGCTTAAATGTGGGACTAATACTGAAGATATCTTGAATGTTGGTGAAAAAGTTACAGCTCATTCTTCAGGTTCCTCTAACAATGGCGAGGCTGCTACAGAAGATGAAAGTACTTTAAACCCTTCAAATGTTGTAAATTGGACAAAAGAATTTTGGTATCGATCCGAGGTGTTAAAACTTAAGGCTGACGTTGATCAGGGTTTGGAGGCTCTTAGAATGTCACATAAGTATGAATATAAGTTAGCAGAAGAAAGCCTTTGGGCACATGTGAAATATTTACAAAATCTTCTTCAGCAACTGAACAAAGAGAAGTCTGAATTAGCATGTCAACCGAACACATCTCATTCAAGTGTCTTGTTTCAAACTGTCGAGAAACGAAAGGAACAGCTAAGGCAGGCAATGATTAAATACGAAGAAATGAAGAAGGTAGCAAATGGTTTTGGCTGCACACCCAAAAATATTTTAGAGAAACACTTTGGTCTATAA 1035 0.3961 MNPSVDELKQFELEEQGEPDVPGDIDGCKAGNQKCSSLVLEKEYPSVMPCDFCCAEPKFCRECCCILCYKAVDSSHGGYSYIMCKVKHDDAICGHVAHLECAFRAYTAGTLGGMIGLDAEYFCRRCNGRTELISHVYKLLLTSETIDSDDVKEKMLNLGINLLHGSEKVAAKEIMSRIALAMSKLKCGTNTEDILNVGEKVTAHSSGSSNNGEAATEDESTLNPSNVVNWTKEFWYRSEVLKLKADVDQGLEALRMSHKYEYKLAEESLWAHVKYLQNLLQQLNKEKSELACQPNTSHSSVLFQTVEKRKEQLRQAMIKYEEMKKVANGFGCTPKNILEKHFGL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05355 344 MobiDBLite consensus disorder prediction 202 222 - -
Trre2g05355 344 Coils Coil 273 293 - -
Trre2g05355 344 Coils Coil 303 326 - -
Trre2g05355 344 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 16 344 - -
Trre2g05355 344 Pfam PHD - plant homeodomain finger protein 31 160 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05355 Trre-Chr2 60355936 60357227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05355 56 182 PHD Gene Family AT3G24440 26.718 8.44e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05355 - - psat:127092568 421.009