Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05329 ATGATGGAAGGAACTACTAGCTATTCCAAATTAGGGGCCAAAGAAGAGAGTGGTGTTGACTTGACTCAAATATCTCTTCGACCCATTAGTCTTACTGATCTTGATGATCTAATGTTGTGGACCAGTGATGAAAAAGTGGCCAGGTATTGCACCTGGGAACCTTATACCAGCAAAGAAGAAGGCATCAACTTCATCCAAAACATAGCAAGCAAATCTCTATGGTTCAGAGCGATTTGCCTTCGCAACCGTGCAATTGGGTGCATCGACTTTTGGTCGGGTAACGATAGATGCAAGGACAAAACTGCTGAACTTGGTTATGCTCTGAGCTCCATGTACTGGGGCAAAGGGATTGCCACAATGGTTGTGAAACAAGTGGTTGAAATTGCATTTAAGGAGTTTCCATACTTGGAGAGGCTTGAAGCTCAAGTTGATGTGGAAAATGTTGCTTCTCAGAGAGTGCTGGAGAAGGCTGGTTTTCAAAGGGAGGGAGTTCTCAGGAAATATTGCTTCATCAAGGGAAAAAGTAGAGATATGGTTATGTTCAGTGTTCTGTCAAATGATCTTCAAGTTTGA 573 0.4276 MMEGTTSYSKLGAKEESGVDLTQISLRPISLTDLDDLMLWTSDEKVARYCTWEPYTSKEEGINFIQNIASKSLWFRAICLRNRAIGCIDFWSGNDRCKDKTAELGYALSSMYWGKGIATMVVKQVVEIAFKEFPYLERLEAQVDVENVASQRVLEKAGFQREGVLRKYCFIKGKSRDMVMFSVLSNDLQV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05329 190 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 21 187 - -
Trre2g05329 190 Pfam Acetyltransferase (GNAT) domain 25 160 IPR000182 GO:0016747
Trre2g05329 190 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 24 177 IPR000182 GO:0016747
Trre2g05329 190 Gene3D - 14 189 - -
Trre2g05329 190 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 24 184 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05329 Trre-Chr2 60123205 60123777 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre2g05329 Acetyltransf_3 9.4e-28 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05329 - - gmx:111043201 292.352