Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05287 | ATGGCCTCTAAAACTGAAAGCGAGAGTCCAACAGATACGCCACCATCACCGCCAAAGAATGTATACAAGGATCCTGATGATGGGCGGCAGCGGTTTTTGCTTGAACTGGAATTTGTTCAATGCCTTGCTAATCCTACCTACATCCACTATTTGGCTCAGAACCGATATTTTGAGGATGAAGCATTCATTGGGTACTTAAAGTATCTTCAATATTGGCAACGTCCTGAATATATTAAGTTTATTATGTATCCTCACTGCCTCTATTTTCTTGAGCTTCTTCAGAATGCAAATTTTCGCAATGCAATGGCGCATCCTACCAATAAGGAATTGGCGCATAGACAGCAGTTCTATTTCTGGAAGAACTATAGGAACAATCGGCTAAAACACATTTTACCAAAACCACTTCCAGAACCTACTGCTGCACTTCCTGCTTCAACTCAACCCCAGCCACCTGTGCCTGCACTGCCACCGCCACCACCACCACCTGCTGCTACAAATGTTGCTGTGACAACATCTTCTACTCAAGCTCCTTCTCCAATGCCATACGGTTCTGGTCTTGCAAAAAATGACCCGAGGAATCCTACAGTTGATAGAAGGAAAAGAAAGTGA | 609 | 0.4384 | MASKTESESPTDTPPSPPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWKNYRNNRLKHILPKPLPEPTAALPASTQPQPPVPALPPPPPPPAATNVAVTTSSTQAPSPMPYGSGLAKNDPRNPTVDRRKRK | 202 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05287 | 202 | MobiDBLite | consensus disorder prediction | 166 | 180 | - | - | |
Trre2g05287 | 202 | Pfam | SOH1 | 30 | 122 | IPR008831 | GO:0003712|GO:0006355|GO:0016592 | |
Trre2g05287 | 202 | Gene3D | Mediator of RNA polymerase II, submodule Med31 (Soh1) | 18 | 119 | IPR038089 | - | |
Trre2g05287 | 202 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 | 3 | 202 | IPR008831 | GO:0003712|GO:0006355|GO:0016592 | |
Trre2g05287 | 202 | MobiDBLite | consensus disorder prediction | 133 | 202 | - | - | |
Trre2g05287 | 202 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Trre2g05287 | 202 | MobiDBLite | consensus disorder prediction | 136 | 165 | - | - | |
Trre2g05287 | 202 | FunFam | Mediator of RNA polymerase II transcription subunit 31 | 18 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05287 | Trre-Chr2 | 59766582 | 59769542 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SOH1 | Trre2g05287 | Med31 | 1.6e-35 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05287 | K15153 | - | gmx:100818057 | 321.242 |