Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05285 ATGGTAGAAAAAGGATTGTTGCTTTTGTTCTATTCTGTCAAGAACAAGAACAAGTTGAGATTTTTCATGTTCCCTTTGACATTGATGTTTTTCACGGTGTTGCTGTTTTCTCCATTTGCATTTTCACTCACTGAAGAAGGACAAGCATTAATGGCAATGAAGTCTTCCTTCAACAACATAGCTGACGTTCTGCTTGACTGGGATGATGTGCACAATGATGACTTCTGCTCATGGCGTGGTGTCTTATGTGATAATGTCAGTGTTGCTCTTACTGTGGTATCACTGAATTTATCAAGCTTGAATCTTGGTGGTGAGATATCACCAGCTGTTGGTGATTTAAGAAACTTGCAGTCCATCGACTTGCAAGGGAACAAACTAACTGGTCAAATCCCGGATGAAATTGGAAACTGTGGTGCACTTGTTCATCTGGATTTATCTGATAATCAGCTATACGGTGATATACCTTTCTCTATATCAAAGCTGAAGCAACTTGAGTTTTTGAATTTGAAAAACAATCAGTTGACTGGTCCTATTCCTTCAACATTATCCCAAATTCCAAACCTCAAGACTCTTGATCTAGCTCGAAATAAGCTCATAGGTGAGATACCGAGGCTACTTTATTGGAATGAAGTATTGCAATACCTTGGTTTGCGAGGGAACACGTTGACAGGAATTTTGTCTCCCGATATTTGCCAGTTATCTGGTTTGTGGTACTTTGATGTCAGAGACAATAATTTGACTGGTACAATACCTGAAAGCATCGGCAACTGTACAAGTTTTGAAATTTTCGACATATCATATAATCAGATTACTGGGGAGATTCCTTATAACATTGGATTTCTTCAAGTTGCTACTTTGTCACTTCAAGGAAATAGATTAACTGGCAAGATACCAGAAGTGATTGGTTTGATGCAAGCTCTAGCAATTTTGGATTTGAGTGAGAATCAGTTAGTGGGACCAATTCCTCCAATACTAGGAAATCTGTCTTTTACCGGCAAGCTGTACCTTCATGGAAACAAGCTCACTGGTTCAATACCTCCCGAGCTTGGCAATATGTCTAAACTGAGCTACCTGCAATTGAATGATAATCAACTGGTGGGGCAAATTCCTAATGAGTTTGGCAAGCTTGAACATCTGTTTGAATTGAATCTTGCCAATAATCGTCTTGATGGATCTATTCCGCATAACATAAGCTCATGCACAGCCTTAAATCAGTTTAATGTGCACGGCAACCAATTAAGCGGTTCTATTCCGTTGAGCTTTCGTAACCTTGAGAGTTTGACTTACTTGAATCTCTCTGCCAACAACTTCAAGGGGATTATACCGGTTGAGTTGGGTCATATCATTAATCTAGATACACTGGACCTATCTAGCAATAATTTTTCAGGCCATGTCCCAGCTTCAGTTGGTTATCTCGAGCATCTTTTGACATTGAACTTGAGTCATAACCATCTTGACGGTCCCTTGTCTGCTGAATTTGGAAATCTCAGAAGCATACAGACTATTGATATGTCCTTCAACAACCTGTCGGGCAACATTCCTCCAGAAATTGGACAGCTGCAGAACCTTGCATCTTTGATTTTGAACAACAATGACCTGCATGGGAAGATTCCGGAACAGCTCACCAATTGTTTCAGTCTTTCTTCCTTGAACTTTTCTTATAACAACTTCACTGGAATAGTTCCATCTACGAAGAACTTCACACGGTTCTCAGCTGACAGCTTCATTGGAAATCCATTATTATGTGGAAATTGGTTAGGATCTATATGTCGTCCTTATGTTCCAAAGTCAAGAGAGATTTTCTCTAAAGTTGCAGTTGTATGTCTCACTCTTGGTATCATCGTGTTATTGGCTATGGTAATTATTGCTATCTATAGATCCATCCATTCAAAGCAGCTGATGAAAGGATCTAGTAAGACTGTACAAGTGCCTCCTAAACTTGTAATTCTTCATATGGATTTGGCATTACACACTTTGGATGATATAATGAGAAGCACCGAGAATCTCAGTGAGAAATTTATCGTAGGGTATGGTGCCTCTAGTACTGTATACAAGTGTGTGTTGAAAAACTCCCGACCGGTTGCAGTCAAGCGATTGTACAATCAGCATCCACACAATGTAAAAGATTTTGAAACAGAACTTGAAACTATTGGCAGCATTAGGCATAGAAATCTTGTCACCTTGCACGGCTATGCCCTTACTCCTTATGGAAATCTTCTTTTCTATGAGTATATGGCAAATGGTTCTCTGTGGGATCTTCTACATGGTCCACTAAAGGTAAAACTTGATTGGGAAACACGGATGAGGATTGCTGTTGGAGCAGCTGAAGGACTTGCGTATCTTCACCATGATTGCAACCCTCGAATTGTTCACAGGGACATCAAGTCTTCGAATATTTTGCTGGACGAGAACTTTGAAGCTCACCTCTCTGATTTTGGCACTGCTAAATGCATCCCCGCCACAAAAACTCACGCCTCAACTTATGTTCTTGGAACCATTGGCTATATTGATCCTGAATATGCTCGAACATCTAGGCTGAATGAAAAATCTGATGTATATAGCTTTGGCATTGTGCTGCTAGAGCTACTTACCGGAAAGAAGGCTGTGGACAATGACTCCAATTTGCATCAATTGATACTTTCGAAGGCGGATAATAACACTGTAATGGAGGCTGTGGATCCAGAGGTATCCATTACTTGCATCGATTTGGCCCATGTCAAGAAAACCTTTCAACTTGCTTTGCTTTGCACCAGAAGGAACCCTTCTGAGAGACCTACCATGCATGAAGTAGCTAGGGTGCTTATTTCACTACTTCCCGCACCTCCAAGTAAAGTTAAAGTTGCTGCTGCTGCTGCTGCAAAGAGTTTTGACTATGCGCCTTTTGTGGTTGAGAAGGGACAGCAACACCGAAAATTGGATGGACTACAACCTCAGCAGGATAACAGTTCGCCCAATGCTGAATGGTTTGTTCGTTTCGGGGATGCCATATCCAAGAGCTCCCACTGA 3006 0.4088 MVEKGLLLLFYSVKNKNKLRFFMFPLTLMFFTVLLFSPFAFSLTEEGQALMAMKSSFNNIADVLLDWDDVHNDDFCSWRGVLCDNVSVALTVVSLNLSSLNLGGEISPAVGDLRNLQSIDLQGNKLTGQIPDEIGNCGALVHLDLSDNQLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLSQIPNLKTLDLARNKLIGEIPRLLYWNEVLQYLGLRGNTLTGILSPDICQLSGLWYFDVRDNNLTGTIPESIGNCTSFEIFDISYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENQLVGPIPPILGNLSFTGKLYLHGNKLTGSIPPELGNMSKLSYLQLNDNQLVGQIPNEFGKLEHLFELNLANNRLDGSIPHNISSCTALNQFNVHGNQLSGSIPLSFRNLESLTYLNLSANNFKGIIPVELGHIINLDTLDLSSNNFSGHVPASVGYLEHLLTLNLSHNHLDGPLSAEFGNLRSIQTIDMSFNNLSGNIPPEIGQLQNLASLILNNNDLHGKIPEQLTNCFSLSSLNFSYNNFTGIVPSTKNFTRFSADSFIGNPLLCGNWLGSICRPYVPKSREIFSKVAVVCLTLGIIVLLAMVIIAIYRSIHSKQLMKGSSKTVQVPPKLVILHMDLALHTLDDIMRSTENLSEKFIVGYGASSTVYKCVLKNSRPVAVKRLYNQHPHNVKDFETELETIGSIRHRNLVTLHGYALTPYGNLLFYEYMANGSLWDLLHGPLKVKLDWETRMRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKCIPATKTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHQLILSKADNNTVMEAVDPEVSITCIDLAHVKKTFQLALLCTRRNPSERPTMHEVARVLISLLPAPPSKVKVAAAAAAKSFDYAPFVVEKGQQHRKLDGLQPQQDNSSPNAEWFVRFGDAISKSSH 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05285 1001 Gene3D Ribonuclease Inhibitor 43 208 IPR032675 -
Trre2g05285 1001 Gene3D Ribonuclease Inhibitor 466 592 IPR032675 -
Trre2g05285 1001 Gene3D Ribonuclease Inhibitor 283 368 IPR032675 -
Trre2g05285 1001 Gene3D Ribonuclease Inhibitor 369 465 IPR032675 -
Trre2g05285 1001 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 745 945 - -
Trre2g05285 1001 Gene3D Transferase(Phosphotransferase) domain 1 745 949 - -
Trre2g05285 1001 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
Trre2g05285 1001 SMART LRR_typ_2 352 375 IPR003591 -
Trre2g05285 1001 SMART LRR_typ_2 472 495 IPR003591 -
Trre2g05285 1001 SMART LRR_typ_2 161 184 IPR003591 -
Trre2g05285 1001 SMART LRR_typ_2 520 544 IPR003591 -
Trre2g05285 1001 SMART LRR_typ_2 113 137 IPR003591 -
Trre2g05285 1001 SMART LRR_typ_2 233 257 IPR003591 -
Trre2g05285 1001 SMART LRR_typ_2 185 209 IPR003591 -
Trre2g05285 1001 SMART LRR_typ_2 376 400 IPR003591 -
Trre2g05285 1001 SMART LRR_typ_2 424 447 IPR003591 -
Trre2g05285 1001 SMART LRR_typ_2 304 328 IPR003591 -
Trre2g05285 1001 Pfam Protein kinase domain 674 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05285 1001 SUPERFAMILY Protein kinase-like (PK-like) 652 934 IPR011009 -
Trre2g05285 1001 Pfam Leucine Rich repeats (2 copies) 162 203 IPR025875 -
Trre2g05285 1001 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 210 319 - -
Trre2g05285 1001 SUPERFAMILY RNI-like 226 563 - -
Trre2g05285 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Trre2g05285 1001 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 43 209 - -
Trre2g05285 1001 SMART serkin_6 669 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05285 1001 Gene3D Ribonuclease Inhibitor 209 282 IPR032675 -
Trre2g05285 1001 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Trre2g05285 1001 Pfam Leucine rich repeat 450 509 IPR001611 GO:0005515
Trre2g05285 1001 Pfam Leucine rich repeat 333 389 IPR001611 GO:0005515
Trre2g05285 1001 Gene3D Phosphorylase Kinase; domain 1 630 744 - -
Trre2g05285 1001 ProSiteProfiles Protein kinase domain profile. 669 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05285 1001 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 320 593 - -
Trre2g05285 1001 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 640 744 - -
Trre2g05285 1001 SUPERFAMILY L domain-like 44 343 - -
Trre2g05285 1001 Pfam Leucine Rich Repeat 115 137 IPR001611 GO:0005515
Trre2g05285 1001 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Trre2g05285 1001 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 185 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05285 Trre-Chr2 59751778 59759374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05285 281 563 Receptor kinase-like Gene Family AT5G07180 38.869 1.03e-46 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Trre2g05285 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05285 K20718 - gmx:100811653 1649.8