Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05273 ATGTCCACGTCATCACCACCACCACCTCAAACTAACAACAACCATACCTCCACCGTCATCTCCGGCTGCTCTTTCTTCCTCGCACTTCTCCACTGCCTCCGCAACAAAAAACGAACTACTCCATCCTCCGATTCAGACTCCAACCCTCCTCATCCATTCTCATACTCCCTCCTCCGCCGCGCAACTAATTCCTTCTCCACTATCCTCGGTCATGGCGGCTTCGGTCCTGTCTACTCCGGAATCCTGTCTTCCTCCGGTAAACCAATCGCCGTCAAGCTAATGAACTCCACAACCCTCGGCGGTCAAGGCGAACGTGAATTCCACAACGAACTCTTCTTCGCTTCTAAACTTCAATCCAACCTCCTTGTCCCTGCAATCGGCTTCTCCTCCGATCCAAAACGCCGTCGTTTTGTTCTCGTCTACGACCTTATGCAAAACGGTTGA 444 0.5203 MSTSSPPPPQTNNNHTSTVISGCSFFLALLHCLRNKKRTTPSSDSDSNPPHPFSYSLLRRATNSFSTILGHGGFGPVYSGILSSSGKPIAVKLMNSTTLGGQGEREFHNELFFASKLQSNLLVPAIGFSSDPKRRRFVLVYDLMQNG 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05273 147 Gene3D Phosphorylase Kinase; domain 1 28 142 - -
Trre2g05273 147 PANTHER OS07G0586332 PROTEIN 23 147 IPR044576 -
Trre2g05273 147 ProSiteProfiles Protein kinase domain profile. 63 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05273 147 Pfam Protein tyrosine and serine/threonine kinase 66 147 IPR001245 GO:0004672|GO:0006468
Trre2g05273 147 SUPERFAMILY Protein kinase-like (PK-like) 39 147 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05273 Trre-Chr2 59642081 59642729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05273 25 147 Receptor kinase-like Gene Family AT4G21400 38.931 4.99e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Trre2g05273 PK_Tyr_Ser-Thr 3.9e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05273 - - psat:127097028 229.95