Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05256 ATGGGCAAGGATAATTGGTATTGGGGTGGAAGATCCTCCAACAACAAGAGAAAACCTGAATCAGATATCCCTTCTGGTTGCATGTGTGCTGTTTTTCAAGCCTTTGATTTTCATCCCTTTAACTTTTCCATTAACCAACAACAAACCACTCTCAACTCTCCTTCTTCTCCCATACCAAAAATTACTCTCCCCAAAGGAGCTGAAGCACCTAGGAATAGCTTGGAATCAGAAGATGGTACATTCTCATCCATCTCCAAAGAAGATAATTTCAAATTCCCAAAGAACATAAGAATCAAAACAGGTTCAGACAAAAGTTTCAATGATCTTTCCTCTCCAGGAACCAAAACACCAACTTTGGTTGCAAGATTAATGGGTCTTGATCTTCTTCCTGATGCAAATTCACCCTCTTCATCTTCTTCTTCATCACTCTCCACTCCAAACAGACAAGGCCATTACCATAATAGATCAAAGAAAGACAACATCAAAATAATGAAACATAGACACAGCACAGACAGTGTCATCATGCGTTCATCCTTGCCTGAAAATCCAAGATTGTCCTCAGAAACAACATCATATGTTGAACATAGACTATCTCTTCAAATCAACAAAGAAAACAGAAATCTTGGTGAAGATTTAGAGACTCCAAGATCTTCATTTTCAAAAAGGAAATTTTTTGATGATAACAACAATTGTAGAAGTCCAAGTCATTATGCAAGACAAATTGTTAAGCAGGTGAAAGAAAGTGTGAGTAGCAAAGTTGGTCTTGACATAACCAACACAGTGAAAAACAGAGAACAAGTTAAACAAGAATTTGTTGGTCAAATCAGATTCAAGAAAGCTCTAAAACCATTAGAAGAATCAAACCAAGGAAACAAAAACACAACTCATTCCCCAAGACTCAGCAGATTCAATGATACAAACCACAAACATTCACCAAAAAAAGACCAAAACCAAAACACACTCCAAGTACTAAAACAATCATCACCACCACCTGTAGTCAACATTGAAGCACAGGTTTCAAGAGTTTCAACAAAGCCAAAACTTCAAGCAATGTCAGAAAAGGAGGACAAAAATACATTCCCAAAATGCAAGAAAACAGCACATAGAAATTTGAGTCCACGGATCAACAACAACAACAAGCCTCCACAGTCATCATCAATCAGAAACAAGCAAGAGGAATCATTCATTCTCCGACCATCATCATCAGCCACTAAAGCTAATGATATCAAAACCAAAAGCAAAAGAACTCATCCACTTTCAAACAACTCTGTCCCAAATCTTCTCCCTCTCAAAACAAACCCTTCCCCTTTGGCTACAAAAATCCCTCAAAAGCAGGTAAATGATGATGTCCAAGAAGCCAAAAACATGTCACAGTTATTTAGTTGTTCGCGCCAGAAGTACACACTTGCCACCCGAGGAACCGCCACCGGAGTTGAAGACGAAGGATCATCAGAATATCAATACATCACAACCATTCTAAGCCGTACCGGAATACACAGAGCAACAGTAACCAGCCTTCAACATTTTCAATGGTTCTCTTCAACACATCCATTAGACCCATCAATTTTTCACCGTCTTGAACTCTACCCAACAACCAATTCCTCAGTTTCAATTCCCAGCAACAATAAAGATATCAACTTTACGCAGAAAAATCAACTGGGTCCACGTTGTAACCGTAGATTACTGTTTGATTTAGTCGATGAAGTGCTGTCGGAGATTCTCATTAAGCCAAAATGTTACCGTGGGTTGTTGTTGGAGACAGTATGGAAAAAAGTTCGGAGTTTCCCACGTGCGAAATGTGAGGTTTTAGAAGATATTGATGGGTTGATAGAGATGAAGGAAGTGATGGATAAGGTAAAGGAAGAAGAAGAAGAAGAGGAAAAGTTGGTAGCGGAAATTGAAGGGAAAGTATTGGAGATGTTGGTGAATGAAACGTTAACCGTTATGGTGGGTCCGTACGAAAAGAACGGCGTCGTTTTGTGA 1983 0.3903 MGKDNWYWGGRSSNNKRKPESDIPSGCMCAVFQAFDFHPFNFSINQQQTTLNSPSSPIPKITLPKGAEAPRNSLESEDGTFSSISKEDNFKFPKNIRIKTGSDKSFNDLSSPGTKTPTLVARLMGLDLLPDANSPSSSSSSSLSTPNRQGHYHNRSKKDNIKIMKHRHSTDSVIMRSSLPENPRLSSETTSYVEHRLSLQINKENRNLGEDLETPRSSFSKRKFFDDNNNCRSPSHYARQIVKQVKESVSSKVGLDITNTVKNREQVKQEFVGQIRFKKALKPLEESNQGNKNTTHSPRLSRFNDTNHKHSPKKDQNQNTLQVLKQSSPPPVVNIEAQVSRVSTKPKLQAMSEKEDKNTFPKCKKTAHRNLSPRINNNNKPPQSSSIRNKQEESFILRPSSSATKANDIKTKSKRTHPLSNNSVPNLLPLKTNPSPLATKIPQKQVNDDVQEAKNMSQLFSCSRQKYTLATRGTATGVEDEGSSEYQYITTILSRTGIHRATVTSLQHFQWFSSTHPLDPSIFHRLELYPTTNSSVSIPSNNKDINFTQKNQLGPRCNRRLLFDLVDEVLSEILIKPKCYRGLLLETVWKKVRSFPRAKCEVLEDIDGLIEMKEVMDKVKEEEEEEEKLVAEIEGKVLEMLVNETLTVMVGPYEKNGVVL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05256 660 Pfam DUF761-associated sequence motif 108 134 IPR032795 -
Trre2g05256 660 Pfam Domain of unknown function (DUF4378) 485 644 IPR025486 -
Trre2g05256 660 MobiDBLite consensus disorder prediction 48 86 - -
Trre2g05256 660 MobiDBLite consensus disorder prediction 1 22 - -
Trre2g05256 660 Coils Coil 609 639 - -
Trre2g05256 660 MobiDBLite consensus disorder prediction 316 347 - -
Trre2g05256 660 MobiDBLite consensus disorder prediction 370 407 - -
Trre2g05256 660 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 651 - -
Trre2g05256 660 MobiDBLite consensus disorder prediction 130 160 - -
Trre2g05256 660 MobiDBLite consensus disorder prediction 286 301 - -
Trre2g05256 660 MobiDBLite consensus disorder prediction 131 150 - -
Trre2g05256 660 MobiDBLite consensus disorder prediction 282 428 - -
Trre2g05256 660 MobiDBLite consensus disorder prediction 348 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05256 Trre-Chr2 59506944 59509120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05256 111 653 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.107 3.98e-44 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05256 - - mtr:11417683 890.567