Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05220 | ATGGCTTCTCTTTTCAACATTCTAGTATTCTCGTACCTTGTCGTATTCCATTTCCACCTATGTTACGCCATTGAACACAAAAATGACCAAAACCCAGAAAAACTTTCCCTCCTTTCTTTCAAAGGGTCTCTTCAAAATTCTCACTTTCTTTCTTCATGGCACGCTGCAACTCCACACTGTAACTGGGTCGGTGTTACATGTCAACTCGGACGAGTCACCGAGCTCCAACTTCCTTCTCGTTACCTCAGAAGCAATATCTCTCTGTCTCTTTCGTCTCTGTTGTCTCTATCATCTCTCACCATACTCAACCTTGAGGATAATCAGTTTTCCGGCGAAATCCCCGGTGAACTTGGTGGGTTGTTTCATCTGCAAACACTTGACCTTTCCGGCAATGCACTCACCGGTGAAGTACCAGAGAGTATCGGGAACTTGACAAAGCTTCAGTTTCTTGATCTCAGCAACAACTTTCTCTCAGGTTCTCTTCCGTTAACACTTTTCACCGGAACACTCTCTTTGATTTCTATTGATATTTCAAACAACTCGTTTTCCGGCGAAATTCCGTCGGAAATTGGAAACTGGAAGAATCTCACTGCACTTTACGTTGGGATTAACAAGTTGTCTGGTAAATTGCCTAAGGAAATTGGTGAGCTTGGGAAGCTTGAAGTTTTGTATTCACCTTCTTGTTTGATCGAAGGTCCATTACCTGAAGAAATGGAAAAGCTTGAATCGTTGACCAAACTTGACCTTTCTTATAACCCTTTGAGATGTTCAATTCCAAAGTTTATTGGAAAGTTGAAAAATTTGAAAATTTTGAACCTTGTTTTTTCTGAGCTTAATGGGTCAATTCCACCTGAGTTAGGAAATTGTTCAAATTTAACTTCTGTGATGCTTTCTTTCAATTCACTATCTGGTTCACTTCCTCAAGAGCTTTCTCAGCTTCCTATAAAGACATTTTCAGCTGAAAAGAATCTTCTTCGTGGAGCTTTGCCTTCTTGGCTTGGAAAATGGGCTAATGTTGATTCTTTATTGCTTTCGGCTAACCGATTTTCCGGTGTCATTCCACCTGAGATTGGAAATTGTTCTGTTATGGAGCATCTAAGTTTGAGTAGTAATTTGTTGACAGGTTCTATACCTGAGGAGCTTTGTAATGCTGCTTCACTTTTGGAGATTGATCTTGATGATAACTACCTTAGTGGTTCAATTGAGAAAGCTTTTGTTAATTGTAAGAATCTTACTCAGTTGGTTTTGATGAACAATCAGATTGTTGGTTCTATCCCAAACTACCTTTCTGAGCTTCCTTTGATGGTGTTGGACTTGGATAACAACAATTTTAGTGGACATATACCTTCTAGTTTGTGGAACTTATCAACACTGATGGAATTTTCTGCTGCTAATAACCAATTAGAGGGTTCTCTTCCTATGGAGATTGGGAATGCTGTTATTCTACAAAGGCTTGTTCTTAGCAACAATCGTTTGATCGGTACTATTCCTAAGGAAATTGGAAGTCTTTCGAGTCTTTCGGTTTTTAATTTGAATGGGAACATGCTTGAAGGAAACATTCCAAGTGAGCTTGGTGATTGCATTTCACTCACTACATTGGACCTTGGAAACAATCAGCTCAATGGTTCAATTCCTGACAAATTGGTGAAACTAAGTGAATTACAGTGCCTAGTTCTTTCTCACAATAATTTGTCTGGCTCTATACCTGCCAAAGAATCTTCGTATTTTCGACAACTTACGGTTCCTGATTTGAGCTTTGTTCAACACCTTGGTGTATTGGATCTTTCTCACAATAGATTGTCTGGCACCATACCTGATGAATTAGGGAACTGTGTAGTGGTTGTTGATCTATTGCTTAGCAATAACATGTTTTCCGGTAGCATACCAAGATCACTCTCGCGCTTGACAAATCTAACAACTTTGGATTTGTCTGGAAACTTGTTGTCAGGTTCCATTCCACTAGAGCTTGGAGATGCTGTGACACTGCAAGGTTTATATTTGGGACAGAATCAACTCTCCGGTGCAATCCCTGGAAGTTTTGGGAAGTTGACTCGTTTGGTGAAGCTGAATTTAACAGGAAATATGCTGTATGGTCCAATTCCAATCAGTTTTGGGAACATGAAGGAATTGACTCACTTGGACTTGAGCTATAATGAGCTCACTGGCGAGCTTCCATCCATTATGTCGGGTGTGCAAAGTCTAGTTGGTCTTTACGTGCAGAATAACAGGCTTTCAGGCCATGTCGGCGAGCTTTTCTCAAACTCCATGACATGGAGGATTGAGACAATGAATTTAAGTTGTAATTGCTTCGACGGGAACTTGCCATGGTCTTTGGGAAATCTTTCCTACTTAACAATTTTGGATCTTCACAGAAATCAGTTGACCGGAGAGATTCCTTTAGACTTAGGGAATCTAATGCAACTTGAGTATTTTGATGTTTCAGGTAATAAATTATCTGGAAAAATTCCGGAGAAGCTATGCAGCCTAGTTAATTTGAATTACCTAGATTTGTCTCAAAACAGATTGGAAGGGCCTATTCCTAGAACTGGTATTTGCCAAAACCTATCAAGAGTTAGATTTTTGGGAAACAGAAACCTTTGTGGCCAGATGTTGGGAACAAATTGTGAGGTCAAAAGCATTGGTAGATATGGATTGTTTAATGCATGGAGGCTTGGTGGAATTGCAATCACAGTCATATTAATAACCTTGATCTTTGCTTTTCTTCTGCATAGATGGATTAGCAGAAAGCACAATGATCCTGAGGAACTCGAGGATAGGAAACTGAACAGTTATGTGGACCAAAACCTTTACTTCTTAAGCAGTAGCAGATCAAAGGAACCTTTGAGTATCAATGTAGCAATGTTTGAGCAGCCTCTTCTGAAGTTAACCTTGGTTGATATCCTCGAAGCTACCGACAATTTCTGCAAGACAAACATAATCGGAGACGGAGAGTATGGACAGAGTGGAAGATCAACAACAAGAGGCGACGTCTATAGTTTCGGTGTCATTTTACTTGAATTGGTGACCGGCAAAGAGCCGACAGGACCAAATTTCAAAGATATTGAAGGTGGAAACTTGGTTGGATGGGTTGGTCAGAAGATCAAGAAGGGACAGGCTGCTGAAGTTCTTGATCCTACGGTTCTCGACGCAGATTCTAAGCAGATGATGCTTCAAATGCTTCAGATTGCTTGTGTCTGTCTCTCTGATAATCCTGCAAACAGGCCTACCATGTTTCAAGTGCACAAATTCTTGAAGGGGATGAAAGGCGATATCAGTAATTAA | 3282 | 0.4028 | MASLFNILVFSYLVVFHFHLCYAIEHKNDQNPEKLSLLSFKGSLQNSHFLSSWHAATPHCNWVGVTCQLGRVTELQLPSRYLRSNISLSLSSLLSLSSLTILNLEDNQFSGEIPGELGGLFHLQTLDLSGNALTGEVPESIGNLTKLQFLDLSNNFLSGSLPLTLFTGTLSLISIDISNNSFSGEIPSEIGNWKNLTALYVGINKLSGKLPKEIGELGKLEVLYSPSCLIEGPLPEEMEKLESLTKLDLSYNPLRCSIPKFIGKLKNLKILNLVFSELNGSIPPELGNCSNLTSVMLSFNSLSGSLPQELSQLPIKTFSAEKNLLRGALPSWLGKWANVDSLLLSANRFSGVIPPEIGNCSVMEHLSLSSNLLTGSIPEELCNAASLLEIDLDDNYLSGSIEKAFVNCKNLTQLVLMNNQIVGSIPNYLSELPLMVLDLDNNNFSGHIPSSLWNLSTLMEFSAANNQLEGSLPMEIGNAVILQRLVLSNNRLIGTIPKEIGSLSSLSVFNLNGNMLEGNIPSELGDCISLTTLDLGNNQLNGSIPDKLVKLSELQCLVLSHNNLSGSIPAKESSYFRQLTVPDLSFVQHLGVLDLSHNRLSGTIPDELGNCVVVVDLLLSNNMFSGSIPRSLSRLTNLTTLDLSGNLLSGSIPLELGDAVTLQGLYLGQNQLSGAIPGSFGKLTRLVKLNLTGNMLYGPIPISFGNMKELTHLDLSYNELTGELPSIMSGVQSLVGLYVQNNRLSGHVGELFSNSMTWRIETMNLSCNCFDGNLPWSLGNLSYLTILDLHRNQLTGEIPLDLGNLMQLEYFDVSGNKLSGKIPEKLCSLVNLNYLDLSQNRLEGPIPRTGICQNLSRVRFLGNRNLCGQMLGTNCEVKSIGRYGLFNAWRLGGIAITVILITLIFAFLLHRWISRKHNDPEELEDRKLNSYVDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATDNFCKTNIIGDGEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPNFKDIEGGNLVGWVGQKIKKGQAAEVLDPTVLDADSKQMMLQMLQIACVCLSDNPANRPTMFQVHKFLKGMKGDISN | 1093 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05220 | 1093 | Gene3D | Ribonuclease Inhibitor | 317 | 577 | IPR032675 | - | |
Trre2g05220 | 1093 | Gene3D | Ribonuclease Inhibitor | 578 | 878 | IPR032675 | - | |
Trre2g05220 | 1093 | Gene3D | Ribonuclease Inhibitor | 22 | 98 | IPR032675 | - | |
Trre2g05220 | 1093 | Pfam | Leucine rich repeat N-terminal domain | 31 | 67 | IPR013210 | - | |
Trre2g05220 | 1093 | Gene3D | Ribonuclease Inhibitor | 242 | 316 | IPR032675 | - | |
Trre2g05220 | 1093 | Pfam | Protein tyrosine and serine/threonine kinase | 987 | 1084 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g05220 | 1093 | SUPERFAMILY | L domain-like | 330 | 581 | - | - | |
Trre2g05220 | 1093 | SUPERFAMILY | L domain-like | 36 | 314 | - | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 829 | 854 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 635 | 659 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 587 | 611 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 96 | 119 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 144 | 168 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 551 | 575 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 241 | 265 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 781 | 805 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 731 | 754 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 707 | 730 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 503 | 527 | IPR003591 | - | |
Trre2g05220 | 1093 | SMART | LRR_typ_2 | 120 | 143 | IPR003591 | - | |
Trre2g05220 | 1093 | Pfam | Leucine Rich repeat | 710 | 723 | IPR001611 | GO:0005515 | |
Trre2g05220 | 1093 | Pfam | Leucine Rich repeat | 636 | 650 | IPR001611 | GO:0005515 | |
Trre2g05220 | 1093 | Pfam | Leucine Rich Repeat | 243 | 265 | IPR001611 | GO:0005515 | |
Trre2g05220 | 1093 | SMART | LRR_sd22_2 | 829 | 857 | - | - | |
Trre2g05220 | 1093 | SMART | LRR_sd22_2 | 707 | 733 | - | - | |
Trre2g05220 | 1093 | SMART | LRR_sd22_2 | 635 | 656 | - | - | |
Trre2g05220 | 1093 | SMART | LRR_sd22_2 | 120 | 146 | - | - | |
Trre2g05220 | 1093 | FunFam | LRR receptor-like serine/threonine-protein kinase FLS2 | 30 | 168 | - | - | |
Trre2g05220 | 1093 | PRINTS | Leucine-rich repeat signature | 829 | 842 | - | - | |
Trre2g05220 | 1093 | PRINTS | Leucine-rich repeat signature | 590 | 603 | - | - | |
Trre2g05220 | 1093 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 583 | 879 | - | - | |
Trre2g05220 | 1093 | Gene3D | Transferase(Phosphotransferase) domain 1 | 963 | 1092 | - | - | |
Trre2g05220 | 1093 | SUPERFAMILY | L domain-like | 576 | 868 | - | - | |
Trre2g05220 | 1093 | SUPERFAMILY | Protein kinase-like (PK-like) | 984 | 1086 | IPR011009 | - | |
Trre2g05220 | 1093 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 984 | 1086 | - | - | |
Trre2g05220 | 1093 | Gene3D | Ribonuclease Inhibitor | 168 | 241 | IPR032675 | - | |
Trre2g05220 | 1093 | Gene3D | Ribonuclease Inhibitor | 99 | 167 | IPR032675 | - | |
Trre2g05220 | 1093 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 317 | 576 | - | - | |
Trre2g05220 | 1093 | FunFam | leucine-rich repeat receptor protein kinase EMS1 | 169 | 316 | - | - | |
Trre2g05220 | 1093 | Pfam | Leucine rich repeat | 98 | 155 | IPR001611 | GO:0005515 | |
Trre2g05220 | 1093 | Pfam | Leucine rich repeat | 783 | 842 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05220 | Trre-Chr2 | 59218910 | 59222677 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g05220 | 29 | 996 | Receptor kinase-like Gene Family | AT5G07280 | 55.031 | 0.0 | 987 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Trre2g05220 | PK_Tyr_Ser-Thr | 1.4e-05 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05220 | - | - | lja:Lj0g3v0136899.1 | 1541.94 |