Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05157 ATGAACTTCGCGGCCATGGCTATGGCATTATTATATCTAACCACGGTGAAGCCATGGCGCGTTAATTCAGATGAACAACATACGCTTATGGTGAACATGACGCTCGTTACAAATGCACGTGAAACTAGTGCTTTTTGTTTGGATGGGAGTTTACCGGCGTATCATTTGCACAAAGGACATGGAAGAGGGAAAAACAATTGGCTTCTACAATTCGAGGGTGGTGGATGGTGCAATGACCTGACATCATGCTTAGAGAGAGCACAAACTCGTAGGGGTTCATCACATTATATGACTAAGTTGCAGGTCTTTTCTGGTATTTTAAGCAACAATGCTACCCTTAATCCAGACTTTTACAATTGGAATAGGGTGAAGCTAAGATACTGTGATGGAGCTTCATTTACTGGAAACAAAGTGTTCAATAATGGGACAACAAAGCTCTACTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTCATGACCTTCTACCAAAAGGTTTAGAAAAGGCACATAAGGCTTTGCTTTCAGGCTGTTCAGCAGGAGGTTTAGCCACCTTTCACCATTGTGACAATTTTACCAAGTATTTACCAACAAATGCTAGTGTTAAATGCATGAGTGATGCAGGATTTTTTCTTGATGAAAAAGATATCAGTATGAACTACACTATGAGGAAATTTTTCAAAAGTGTAGTTACATTACAGGCGGTAGAGCGGAATCTAAATCGAAATTGTACCAAAGAGTTGTCCTCTTCTGCATACTTGTGCTTCTTTCCGCAATATGCGTTGAAATATATATCAACACCGTATTTTATCTTGAACCCTGCCTATGATGTATACCAATTCAGTAATGTATTGGTGACACCTTCATCCGATCCCCACGGACAATGGAACCACTGCAAGCATAACCTATCGACATGCACACCAGCCGAAATTGATACATTGCAAGATTTTAGGCTCAGCATGATTAATGTTTTGAAACCATTCAACTTATATTCAAACAACGGCGGAATGTTCATAAATTCGTGTTTTGCTCATTGCCAAAGTGAAATGCAAGAAACATGGTTTGGAGCTGATTCTCCAAGAATAAACAATAAGACTATTGCAAAAGCAGTTGGTGATTGGTATTTTAGTAGAAACATAATCCAGGAAATAGATTGTGCATATCCATGTGACAAAACTTGTCATAATTTGATACCATCATAA 1200 0.3883 MNFAAMAMALLYLTTVKPWRVNSDEQHTLMVNMTLVTNARETSAFCLDGSLPAYHLHKGHGRGKNNWLLQFEGGGWCNDLTSCLERAQTRRGSSHYMTKLQVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGNKVFNNGTTKLYFKGQKIWEAIIHDLLPKGLEKAHKALLSGCSAGGLATFHHCDNFTKYLPTNASVKCMSDAGFFLDEKDISMNYTMRKFFKSVVTLQAVERNLNRNCTKELSSSAYLCFFPQYALKYISTPYFILNPAYDVYQFSNVLVTPSSDPHGQWNHCKHNLSTCTPAEIDTLQDFRLSMINVLKPFNLYSNNGGMFINSCFAHCQSEMQETWFGADSPRINNKTIAKAVGDWYFSRNIIQEIDCAYPCDKTCHNLIPS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05157 399 PANTHER NOTUM-RELATED 14 395 IPR004963 GO:0016787
Trre2g05157 399 Pfam Pectinacetylesterase 25 378 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05157 Trre-Chr2 58852072 58857478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05157 7 399 Carbohydrate Esterase AT5G23870 62.437 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05157 K19882 - gmx:100802358 637.106