Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05156 ATGATTCCGTTCATATTTCTGAAGAAGATGAAGTTTGCTGTGGCTTTGGCATTATTGTGTATAATAACGGTGGAGCCATGGTGTGTTAACTCAAAAGAACAGAGGCCTCTGGTGAACATGACGCTCGTTGCCAACGCACGTGATACTGGTGCTCTTTGTTTGGATGGAAGTTTACCTGCGTATCATTTGGACAGAGGATATGGAGCGGGTCAAAACAATTGGCTTCTACAATTCGAGGGAGGTGGGTGGTGCAATGACTTGCCATCATGCTTGGAGAGAGCACAAACTCGCAGGGGTTCTACACGTTATATGACTAAGTGGGAGGTCTTCTCTGGTATATTAAGCAATAATGCCACCCTTAATCCAGACTTTTATAATTGGAATAGGGTGAAGCTGAGATACTGTGATGGAGCTTCATTTACCGGAAACAGATTGTTCAATAATGGGACAACAAAGCTTTACTTTAAAGGGCAAAAGATTTGGGAAGCCATTATTGGCGACCTTCTACCCAAAGGTTTAGGAAAGGCACACAAGGCTTTGCTTTCAGGCTGTTCAGCAGGAGGTTTAGCCACCTTTCACCATTGCGACAACTTCACCAAGTATTTGCCAATTAATGCTAGTGTTAAATGCTTGAGTGATGCAGGTTTTTTCCTTGATGGAAGAGATATCAGTTTGAACCACACTATGAGGTACTTTGTCAAAAGTCTAGTTACATTGCAGGGGATAGAGCAAAACCTTAATAAAAACTGCACCAATGCGTTGTCCTATCCAGACTTGTGCTTCTTTCCGCAATATGTGTTGAAATATATATCAACACCATATTTTATCTTGAACTCCGCCTATGATGTATTCCAATTCCATCATATATTGGTGCCACCTTCAGCTGACCCCCGCGGGCACTGGAACCACTGTAAGCTGAACCCAGCGGCTTGCACACCAGACCAAATTGATACATTGCAAGGGTTTAGGCTCAGCATGACTGCAACTTTGAAGCCCTTCTACTTTTATTCAAATAGAGGGGGGATGTTCATAAATTCATGTTTTGCTCACTGCCAAAGTGAATTGCAAGAAACATGGTTTGGAGCTGATTCTCCAAGAATAAACGACAAGGTACCGATCTTTGACCACAAGAGATGA 1137 0.4274 MIPFIFLKKMKFAVALALLCIITVEPWCVNSKEQRPLVNMTLVANARDTGALCLDGSLPAYHLDRGYGAGQNNWLLQFEGGGWCNDLPSCLERAQTRRGSTRYMTKWEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGNRLFNNGTTKLYFKGQKIWEAIIGDLLPKGLGKAHKALLSGCSAGGLATFHHCDNFTKYLPINASVKCLSDAGFFLDGRDISLNHTMRYFVKSLVTLQGIEQNLNKNCTNALSYPDLCFFPQYVLKYISTPYFILNSAYDVFQFHHILVPPSADPRGHWNHCKLNPAACTPDQIDTLQGFRLSMTATLKPFYFYSNRGGMFINSCFAHCQSELQETWFGADSPRINDKVPIFDHKR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05156 378 Pfam Pectinacetylesterase 32 370 IPR004963 GO:0016787
Trre2g05156 378 PANTHER NOTUM-RELATED 17 370 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05156 Trre-Chr2 58834277 58840558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05156 8 371 Carbohydrate Esterase AT5G23870 66.301 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05156 K19882 - gmx:100802358 624.009