Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05145 ATGCCTACATGGTGGGGAAAATCATCGTCAAAAGAAACCAAGAAGAAAGCGGGTAAGGAAAGTATTATTGATACATTGCACCGAAAATTTAAATTTCCATCCGAGGGTAAACTAAGCAGTATATCCGGAGGATCTCGTAGACGATGCAATGACACAATTTCAGAGAAGGGGGATCATTCTCCATCTGAAACAAGATCTCCTTCACCTTCCAAAGTAGCAAGGTGTCAAAGTTTTGCTGAAAGACCTCACGCTCAACCACTTCCACTTCCTGGTCTGCACCCTTCAAGTGTAGGTCGAGTGGATTCTGAAATTAGTATATCAGCGAAAACGAGGCAGGAAAAGTCCTCCAAGCCATCATTGTTTCTTCCTCTTCCGAGACCTTCATGCATACGCTGCGGGCCAAATCCTGCAGATTTGGATGCAGATATGGTCAATGCTTCAGTCTTCAGTGATTGCTCTGCTGATAGTGATGAGCCAGCTGACTCACGCAATCGTAGTCCTCTCGCAACTGACTCTGAAACTGGGACTAGAACTGCTGCTGGTAGTCCTTCCAGCTTGATGCTCAAGGATCAACCGCCTGCTGTTTCACAAGTGAATTCGAGAGAAGTCAAAAAATCGGCTAACATTCTAAGTAATCACACACCTTCTACTTCACCAAAACGGAGGCCATTACGCCATCATGTTCCAAATCTTCAGGTTCCGCCTCATGGTATCTTCTATAGTGGTCCCGACAGTTCCTTGTCAAGTCCATCAAGGAGTCCATTGAGGGCATTTGGTACAGATCAGGTGTTGAACTCCGCTTTTTGGGCCGGAAAGCCATATCCAGAGGTCAATTTCATTGGATCTGGACACTGCTCTAGTCCAGGTTCTGGTCACAATTCAGGGCATAATTCAATGGGAGGGGACATGTCGGGACCATTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCGGTACCTAGTCCTAGAATGACTAGCCCTGGTCCAAGCTCAAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCTAGAGCTGCTGGAACACCGACTGAATCACCAACAGGACGGGTTGATGATGGAAAACAACAGAGTCATCGTTTGCCCCTCCCTCCTTCAACAGTTACCAATACCTCGCCATTCTCTCACTCTAATTCTGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGCTAGAGCTGATAGTCCAATGAGCTCTGGGTCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACATTTGGACACGTCTATATTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTATGTTTTCAGATGATGCTAAGTCTATGGAAAGTGCTAAGCAATTAATGCAGGAAATTCATTTATTGAGCCGTTTAAGGCATCCAAATATTGTGCAGTATTATGGTTCTGAAACAGTAGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCCATTCATAAACTTCTTCAAGAATATGGGCAATTTGGCGAACTAGCTATTCGAAGTTATACTCAGCAAATTTTGTCAGGGCTTGCTTTTTTACATGCTAAAAATACCCTTCACAGGGACATCAAAGGAGCAAACATACTGGTAGATCCAAATGGCCGGGTCAAGGTTGCCGACTTTGGCATGGCAAAACATATAACAGGGCAATACTGTCCCTTGTCATTCAAAGGAAGTCCTTATTGGATGGCTCCTGAGGTTATAAAGAACTCTAAGGAATGCAGCCTTGGTGTGGATATATGGAGTCTTGGTTGCACAGTTTTGGAAATGGCTACAACTAAACCGCCTTGGTCTCAGTATGAAGGGGTTGCTGCCATGTTCAAAATTGGCAACAGCAAGGAGCTCCCAACAATCCCAGATCATCTCTCAGACGCAGGAAAGGATTTTGTTAGAAAATGCCTTCAACGTAATCCACGTGATCGCCCTTCTGCAAGTGAATTATTGGAACACCCTTTTGTGAAAGGTGCTGCACCTTTAGAAAGACCTATTATGGTTCCTGAAGCTTCGGACCATGTGGCTGGAATTACACATGGAACAAAAGCTCTGGGCATCGGACAAGGAAGAAATCTGTCTGCGTTGGATTCAGATAAACTCTTAGTTCATTCTTCTAGGATTTTGAAAAGTAATCCTTATGAAAGTGAAAACCATATTCAAAGGAATATATCTTGCCCGGTATCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACATCAGAGGAGTGGGAGATTATCTCCTTCTCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACGCCTCTCACCGGCGGCAGTGGTGCCATTCCATTTAATCACTTAAAACAGTCAGCTTACTTTCAAGAGTGTCTCGGAAGCATGCCAAAATCCCCAAACGGTGTCTACATGAACGGCTCTACTCACCACGACCCAAATATTGACATTTTTCGAGGAATGCAAACCGGGTCTCACATTAAATCAGAACTTGTCTCCAGCGAAAATGATGCTCTCAGTAAGCAGTTTGTAAGGTCTCCTCATGCAGAGCCATATGACTTTCAGTCCGTCTTGGCTGATCGTGTTGGCCGGCAGCTTTTGGGGGATCATGTTAAGATTAACCCATCATTTGATCCAAGTCCCAGCTCGTCATTGCTCCATCGAACAAATGGTTTATGA 2697 0.449 MPTWWGKSSSKETKKKAGKESIIDTLHRKFKFPSEGKLSSISGGSRRRCNDTISEKGDHSPSETRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSVGRVDSEISISAKTRQEKSSKPSLFLPLPRPSCIRCGPNPADLDADMVNASVFSDCSADSDEPADSRNRSPLATDSETGTRTAAGSPSSLMLKDQPPAVSQVNSREVKKSANILSNHTPSTSPKRRPLRHHVPNLQVPPHGIFYSGPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYPEVNFIGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAAGTPTESPTGRVDDGKQQSHRLPLPPSTVTNTSPFSHSNSAATSPSMPRSPARADSPMSSGSRWKKGKLLGRGTFGHVYIGFNSESGEMCAMKEVTMFSDDAKSMESAKQLMQEIHLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAFLHAKNTLHRDIKGANILVDPNGRVKVADFGMAKHITGQYCPLSFKGSPYWMAPEVIKNSKECSLGVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSDAGKDFVRKCLQRNPRDRPSASELLEHPFVKGAAPLERPIMVPEASDHVAGITHGTKALGIGQGRNLSALDSDKLLVHSSRILKSNPYESENHIQRNISCPVSPIGSPLLRSRSPHQRSGRLSPSPISSPRTASGASTPLTGGSGAIPFNHLKQSAYFQECLGSMPKSPNGVYMNGSTHHDPNIDIFRGMQTGSHIKSELVSSENDALSKQFVRSPHAEPYDFQSVLADRVGRQLLGDHVKINPSFDPSPSSSLLHRTNGL 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05145 898 MobiDBLite consensus disorder prediction 1 20 - -
Trre2g05145 898 MobiDBLite consensus disorder prediction 286 413 - -
Trre2g05145 898 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 676 - -
Trre2g05145 898 MobiDBLite consensus disorder prediction 286 300 - -
Trre2g05145 898 SUPERFAMILY Protein kinase-like (PK-like) 409 750 IPR011009 -
Trre2g05145 898 CDD STKc_MEKK1_plant 410 667 - -
Trre2g05145 898 MobiDBLite consensus disorder prediction 100 117 - -
Trre2g05145 898 MobiDBLite consensus disorder prediction 879 898 - -
Trre2g05145 898 MobiDBLite consensus disorder prediction 736 782 - -
Trre2g05145 898 MobiDBLite consensus disorder prediction 882 898 - -
Trre2g05145 898 MobiDBLite consensus disorder prediction 368 404 - -
Trre2g05145 898 MobiDBLite consensus disorder prediction 747 781 - -
Trre2g05145 898 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Trre2g05145 898 Pfam Protein kinase domain 412 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05145 898 Gene3D Transferase(Phosphotransferase) domain 1 408 687 - -
Trre2g05145 898 SMART serkin_6 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05145 898 ProSiteProfiles Protein kinase domain profile. 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05145 898 MobiDBLite consensus disorder prediction 34 127 - -
Trre2g05145 898 MobiDBLite consensus disorder prediction 165 218 - -
Trre2g05145 898 FunFam Mitogen-activated protein kinase kinase kinase 409 691 - -
Trre2g05145 898 MobiDBLite consensus disorder prediction 151 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05145 Trre-Chr2 58736774 58741849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05145 4 896 MAP Kinase Kinase Kinase AT1G63700 57.906 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre2g05145 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05145 K20717 - gmx:100797994 1483.77