Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05139 ATGTCTTCACCGGGCTTCCCCGGCGGTGGTAGTTCCTCCGATTTCTACGGCGGAGCAGCTAGTTTTTCTGGTAGATCTATTACACTTCCATCATCCAACATGAACAACAACAACAACAACATCATCAACAATAACAATAATAATTATCTCTCAAACATAGCCACCACCACCACACACAACAACCTTCATCACCCTTTCTACAGAACCCAACAACATCAGCTTCCATCGATTTTCATCGACCCTTCTACACAAATCGCACAACGACAAACATCTTCTCTCATCGGGAAACGCACCCTTGCTGAATTTCAAACCCAAAACATCAACACCAACAACAACCTTAATCTTCACAATTTCAATAATAATCTAAACAGCAACCTTAACCACCACAACAACATCAACAACAACACTGTTCTTTCAAATCTTTTACTTCGTTCTGTGAAACCTAGGAATTTCCAACATGGTTCTCCTATGTCTCCTCTTTCTCCAATTGATTTCTCAAATTCCTCACCTGAATTCATCAACCCTTCTTCTTTTTCTTCACCGCGTTTGGGTTTACCGCTTCGTTCAAACCCTATTGTTCAAAACCCATTACCCATGAACAATTCAATTCTGCAAAACACAAATTTTATTTATCAAAATTCCAATTTTTCGCAGATTCAGAACAGGGTGATTCCAACTAGCTATGACCCACCTAAGAAAATGATGGATCATCGTTTTCTGGAGTTGGAAAAACAGCTTCTTGAAGACAATGATGAAGAAGGAGAACAAGACGCAGTTTCTGGGATTACAAACAGTGAATGGTCTGAAACAATTCAGAATTTGATTAGTTTCGAGAAAAACCCGACCCAGAAACCCGAGTCATACTCACCCACTTCTTCAACAACATCACTGAACTCATGTTCTTCCTCTGTTCTTTCTCCTGCTTCTGGTTGTTCAAAGCAATTGTTAATGGAAGCTGCAACCGCAATTTCCGAAGGTAAAATGGAATATGCTTCGGAGATCCTTAATCGTATGGCTCAGAATTTGAACCCGATAGTGAATTCTGATCGTCGATTAATGGATTGCATGGTTTCAGCATTGAAATCACGCGTGAATCATGTTGAAAATCCACCTCCGGTAGTGGAACTGTTTAGCAAGGAACACGCTGAGTCAACTCAGCTTCTCTTTGATCACTCTCTTTGCTTTAAGGTCTCTTTCATGGCTGCAAACATCGCAATCCTCGAAGCAGTATTCGAAGAAACAACAGATAAAGCTAACAACAAAAACAACGTGATGAAGCTATGTGTGTTGGATTTCGATATTGGTCATGGAAAACAATACATGTCCCTTCTCAATGAACTCCACGCGCGTCTCAATGGTTCACCGGCGACCTTGAAGATCACGGCGATGGCGGAGAACGACGATGAAGAAAGGCTGAAGACGGTGGGAGAAAATTTGGGTCGACAAGCGGAGCGTTTAAGAATCTGGTTTGAATTCAAAGTGGTAACACAAAAACTTGCTGAGTTAACTCGCGAGTCATTAGGTTGTGACTCGGAGGATATTCTTGCTGTGAATTTCGCGTTCAAGCTATTCAGAATGCCAGACGAAAGTGTGTCAACGGAGAATCCACGCGACGCGCTTCTTAGGAGCGTGAAATCACTTGCGCCTCGTGTTGTTATTATTTTGGAGCAAGAAATTAATACCAATACGGCACCGTTTGTTGCACGTGTGGCTGAGTCATGTTCATATTACGGCGCGCTGTTTGACTCAATTGAGTCTACTATGGGGAAGGATAACCCGGAGCGAGTTAAGATCGAGGAAGGACTGAGTCAGAAGCTGTGTAACGCGGTTGCTTGTGAAGGGAGAGATCGTGTGGAGCGTTGTGAAGTGTTTGGGAAGTGGCGTGCACGCATGAGTATGGCTGGGTTTAGGTTAAACCCAGTGAGTCAGAAAGTGGCTGAGTCAATTAAAGCGCGGCTCGCGCCAGGAAGCCGAGTCACTGTGAGTGAAGAAAACGGTGGCGTTTGCTTTGGTTGGATGGGAAGAACTCTCACCGTTGCATCTGCTTGGCGTTAA 2055 0.4345 MSSPGFPGGGSSSDFYGGAASFSGRSITLPSSNMNNNNNNIINNNNNNYLSNIATTTTHNNLHHPFYRTQQHQLPSIFIDPSTQIAQRQTSSLIGKRTLAEFQTQNINTNNNLNLHNFNNNLNSNLNHHNNINNNTVLSNLLLRSVKPRNFQHGSPMSPLSPIDFSNSSPEFINPSSFSSPRLGLPLRSNPIVQNPLPMNNSILQNTNFIYQNSNFSQIQNRVIPTSYDPPKKMMDHRFLELEKQLLEDNDEEGEQDAVSGITNSEWSETIQNLISFEKNPTQKPESYSPTSSTTSLNSCSSSVLSPASGCSKQLLMEAATAISEGKMEYASEILNRMAQNLNPIVNSDRRLMDCMVSALKSRVNHVENPPPVVELFSKEHAESTQLLFDHSLCFKVSFMAANIAILEAVFEETTDKANNKNNVMKLCVLDFDIGHGKQYMSLLNELHARLNGSPATLKITAMAENDDEERLKTVGENLGRQAERLRIWFEFKVVTQKLAELTRESLGCDSEDILAVNFAFKLFRMPDESVSTENPRDALLRSVKSLAPRVVIILEQEINTNTAPFVARVAESCSYYGALFDSIESTMGKDNPERVKIEEGLSQKLCNAVACEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVAESIKARLAPGSRVTVSEENGGVCFGWMGRTLTVASAWR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05139 684 MobiDBLite consensus disorder prediction 278 299 - -
Trre2g05139 684 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 272 674 IPR005202 -
Trre2g05139 684 Pfam GRAS domain family 313 684 IPR005202 -
Trre2g05139 684 ProSiteProfiles GRAS family profile. 303 684 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05139 Trre-Chr2 58661154 58663208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05139 69 684 GRAS Transcription Factor Family AT5G52510 47.214 1.62e-152 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre2g05139 GRAS 4.6e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05139 - - tpra:123914170 1093.95