Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05124 ATGGCGGTAGAATTTTCCACCGCCACAACCTTAAAACCCAACACTCTCCTCCAAACCTCAACTTCCCCTAAAACAACCTCAACACTGTTGTTCTTCACCCCTTTAAGAGGCTTTCGTCATAGCAAAATCCTTCAAACACAAACAAGAACAACTAAGAAGCGTTTCACCGTTTGTGTTATCACAGAGGATCCGAAAAACAGCACCCAAATCAAAACAGAGGAAAAATCAGAACCTCCCAATGATAAACCCAACCCTCATTTCTTAGTTGCACAAAAATTGGCTAGAAAAAAGTCACAAAGGTTCACTTACCTTGTTGCTGCTGTAATGTCTAGCTGTGGTGTTACTTCTATGGCAATTTTAGCTGTTTATTATAGATTCTCATGGCAAATGGAGGGTGGTGGAGAGGTTCCTTGGTCTGAAATGTTTGGTACATTTGCCCTCTCAGTGGGTGCTGCTGTAGGTATGGAGTTTTGGGCAAGATGGGCTCATAGGGCTCTATGGCATGCTTCCTTGTGGCATATGCACGAGTCACACCATCGACCAAGAGAAGGTCCATTTGAGCTTAATGATGTTTTTGCAATAATTAATGCTGTCCCTGCAATTGCACTTCTCTCATTCGGTTTTTTTAACAAGGGATTGCTTCCTGGACTCTGTTTTGGTGCAGGTCTTGGAATCACAGTGTTTGGGATTGCATATATGTTTGTCCATGATGGATTGGTTCATAAGAGATTCCCTGTGGGTCCCATTGCCAATGTGCCCTATTTCACAAGAGTTGCTGCTGCTCACCAACTCCACCATTCGGACAAATTCAAAGGGGTGCCATATGGGCTCTTTTTAGGACCTAAGGAAGTTGAAGAAGTGGGAGGGTTGGAAGAGCTAGAGAAAGAGATAAGTAGAAGAACAAGATCATATACCAGCTCATGA 924 0.4329 MAVEFSTATTLKPNTLLQTSTSPKTTSTLLFFTPLRGFRHSKILQTQTRTTKKRFTVCVITEDPKNSTQIKTEEKSEPPNDKPNPHFLVAQKLARKKSQRFTYLVAAVMSSCGVTSMAILAVYYRFSWQMEGGGEVPWSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFNKGLLPGLCFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIANVPYFTRVAAAHQLHHSDKFKGVPYGLFLGPKEVEEVGGLEELEKEISRRTRSYTSS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05124 307 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 304 IPR045019 GO:0016491
Trre2g05124 307 MobiDBLite consensus disorder prediction 66 85 - -
Trre2g05124 307 Pfam Fatty acid hydroxylase 151 278 IPR006694 GO:0005506|GO:0008610|GO:0016491
Trre2g05124 307 MobiDBLite consensus disorder prediction 67 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05124 Trre-Chr2 58569409 58571482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05124 1 221 Chloroplast and Mitochondria Gene Families AT4G25700 59.735 3.00e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05124 K15746 - gmx:100785541 436.417