Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05093 ATGATAGTTGTTGTTCTTGGTGCCACCAACATGCCATTTGACCTTGATGAAGCAGTTATAAGACGGTTCCAACGCAGGATCATGGTTAGTCTTCCGTCTGCTGAGAACAGGGAAAGGATCTTGAAAACTATCTTAGCTAAGGAAAACCATGGAGATATAGACTTCAAGGAGCTTTCAACTATGACAGAAGGATATAGTGGAAGTGATCTTAAGAATATGTGCACGACTGCAGCTTATCGCCCCGTTAAGGAGCTACTGCAACAGGAGAAAGATAATCAAGTGATTTCCCTCAGGCCTTTAAACATGGAAGACATGAGACAGGCAAAGAATAAGGTGACTGCAAGTTTTGCTGCAGAAGGATCAATGATGAACAGGTTGAAGGAGTGGAATGATATATATGGAGAAGGAGGTTCAGGGAAGAAAGAAACGCATAAGCAACTCAGTTATTATATTTAG 456 0.4145 MIVVVLGATNMPFDLDEAVIRRFQRRIMVSLPSAENRERILKTILAKENHGDIDFKELSTMTEGYSGSDLKNMCTTAAYRPVKELLQQEKDNQVISLRPLNMEDMRQAKNKVTASFAAEGSMMNRLKEWNDIYGEGGSGKKETHKQLSYYI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05093 151 Gene3D - 3 130 IPR027417 -
Trre2g05093 151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 112 IPR027417 -
Trre2g05093 151 Pfam AAA+ lid domain 52 88 IPR041569 -
Trre2g05093 151 ProSitePatterns AAA-protein family signature. 3 22 IPR003960 GO:0005524|GO:0016887
Trre2g05093 151 Gene3D - 32 112 - -
Trre2g05093 151 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05093 Trre-Chr2 58345525 58346492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05093 3 97 Calmodulin-binding Proteins AT3G56690 33.333 1.90e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05093 - - tpra:123913080 273.863