Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05073 ATGGATGCCAACTCAGAGATCTTTGAAGAGCCCGACTTTGTAGTCCGAAATACCCCTGTTTTAGAGTTTAATGGCGCAAAATTGGATAATCTTGCAGAAAAAGTGAGCAATAATATTAGTGAGGGCGCTGAAGTTGAAAATAATGAAGAAATAACTTCAAAGGATGTTGCACAAGATCCAAATGTCATTGAGGTTGAAAATAATGAAGAAATAACTTTAGAGGATGTTGCACAACAAGATTCAAATGTCATTGAGCATCCTAAAAAATTTCCTCCGTACAACCGATACTTGGAAAGTAATTCGCTTAATAGAAAATCTAGGAGAAGGTGCTCTAGTTCAAGAACTAATTGTATGGCATCACTTACCGCTTCAAAGGCACGAAAGAGACATATGTGGGCTATCATTGGTTTTAATAATGTCCATAATCATGGCATGGTTAGCCCAAAGAGTGTGAAGTATCTTAGATGTCATAAGAAAATGAGTGCAGCAACAAAAAGCCTTGTTGAAATGTTTGATAAAGAGGGTTTGCCTACCGGAAAAGTTGCTGCAATGTTTAACAATCCAAGTTCAACCTTCTCTAATAGAGATTGTTGGAATCATCTTAGAGATCTTCGATCTAGAAATTTAGATGTTGGAGATGCCCAAGCTGTGTTCAACTTTTGCATACAAAAGCAAACTGAGAAATAA 687 0.3668 MDANSEIFEEPDFVVRNTPVLEFNGAKLDNLAEKVSNNISEGAEVENNEEITSKDVAQDPNVIEVENNEEITLEDVAQQDSNVIEHPKKFPPYNRYLESNSLNRKSRRRCSSSRTNCMASLTASKARKRHMWAIIGFNNVHNHGMVSPKSVKYLRCHKKMSAATKSLVEMFDKEGLPTGKVAAMFNNPSSTFSNRDCWNHLRDLRSRNLDVGDAQAVFNFCIQKQTEK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05073 228 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 103 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05073 Trre-Chr2 58220261 58221907 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre2g05073 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05073 - - mtr:112422107 181.8