Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05048 ATGCTGTTTTCAATCATAATTGGGTTTCAACGTAACGCCGCCGTTGCCGCCGCCGCCGCCGGAGATACAAGTCCCGACTCTGTCATCTTCACTCTCGAATCTAACTTGAGTCTCGTCTCCTCTGCTTCCGCTAGCGTCGATCGCTGTTCTTTCACTTCCGATGCTCACGACCACGACTCTTTAAACTCTGAAATCTCACCGAGTTGGTATTGTTATGCCAAGACAGAAGTAGAAGAGCAGGCCCTGAATTTCACGGAAAGAACTGGGCTTGATGTTGTAAGCATTTGTCGTACCCTTGTTTTGGGGCCAATTTTACAGTCAACCACTAATGCAAGCAGCATGTTTCTCATCAATCTCTTAAAAGGCTGTGATACATCGGAGAATGAGCACTGTCAGATTAATCGGATAGTTGACGTTCGAGATGTAGCTGATGCAATACTGTTGGCTTATGAGAATCATGAAGCAGAAAGGAGATACATATGCACTTCACACGCTATCAAGGACCGAGATTTTTTTCCTGCGAAGATAAGTGTTAGTAAGTCTTACATATACGCGTTCTGGTTATACGCGTTTGAAGCCATAAATCAATTATTGTGTGGATATGACTTCCTCAAGCAATACCGTTTCAAGAAAAAGTTGGATCAGATACGCAAATATGAGCTGCTTGTGTCATAG 675 0.4385 MLFSIIIGFQRNAAVAAAAAGDTSPDSVIFTLESNLSLVSSASASVDRCSFTSDAHDHDSLNSEISPSWYCYAKTEVEEQALNFTERTGLDVVSICRTLVLGPILQSTTNASSMFLINLLKGCDTSENEHCQINRIVDVRDVADAILLAYENHEAERRYICTSHAIKDRDFFPAKISVSKSYIYAFWLYAFEAINQLLCGYDFLKQYRFKKKLDQIRKYELLVS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05048 224 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 38 180 - -
Trre2g05048 224 Gene3D - 11 183 - -
Trre2g05048 224 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 168 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05048 Trre-Chr2 57953273 57962516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05048 68 185 Monolignol Biosynthesis Gene Families AT2G33590 50.394 2.08e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05048 - - gmx:100784817 142.895