Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05028 ATGGATATGAATTTGTCACAAGGTGGAATACTTCAATGTGGTGTTGGTAATTCTTTTGGTGGATTTGATTTACCTGGATCAATTCAGGTTCATCATCAAGCACACCATCCTCACACTATTCATCCGCGTCAAGGGTCATCGGTTTATGACGGTTTTCCACTCACAATGGGAAGTTTTGATCAAACTATTTCAATAACAGATTATAGTAAGGTAGAGAGAAGCAAAAACTCGACTAGTGAGGATGATGAGCCGAGTTTTAATGAGGATGGTTTTGATGGTCAACATGAAGGGGGTAGAGGTAAAAAGGAATCATCGTTGCCGTGGCAACGTGTGAAGTGGACTAATAAGATGGTGAGACTTATGATAACAGCTGTTTCTTATATAGGTGAGGATATAACTATTGACGGCGGAGGTGGAAATGGAAGAAGGAGATTTGCGGTTTTACAGAAAAAGGGTAAGTGGAAATCTGTATCGAAAGTCATGGCTGAAAGAGGTTATAATGTTTCACCTCAACAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAGAAGCTTAATGATATGTTAGGGAGAGGGACTTCTTGTCAGGTTGTTGAAAATCCTTCACTTTTGGATGTAATAGATTTTCTTTCCGAGAAAGAAAAGGACGATGTTCGAAAAATATTAAGCTCGAAACACTTGTTTTATGAAGAGATGTGTTCTTATCATAATGGTAATAGGTTGCATTTGCCGCATGATCCTGCATTGCAATGTTCGATGCAGTTAGCTCTTCGAACTAGGGATGATCATGATAATGACGATATCAAAAGGTCCCATCTTGACGATCACGATGAAGATGAACACGATGTAGAAATCGATGAACGTGATGATTTTAAAGATAATTGTGCTTCTCGTGGTGATAGCAAAAGAATATTTGGGCGGTTAGGTGGATCGACGAAGAAATTGAAACAAAACCAATGCCAAGAAGATGCTAATGCTTTTGGTCATTCTTCAAATTGTCAAGATCATTTCAACAAAGGTTCATATCCCCGTGAACAATCGGTCCATTCTGATGGTAATAGAGTTATACCAGAAAACATGAGAGCAGCATGGTTACAGAAGCAATGGGTTGACTCTCGCCAAGCTCAGTTAGAAGAGCAAAAGCTACAAATTCAGGTTGAGATGTTGGAATTAGAGAAACAAAGATTAAAGTGGCAGAGGTTTAGTAAGAAAAAGGACCAAGAGTTCGAGAAGCTGAGTCTAGAAAACGAAAGAATGAAGCTCGAAAATGAACGTATGGCTTTAGAACTGAAACGAAAGGAAATTTAG 1314 0.3843 MDMNLSQGGILQCGVGNSFGGFDLPGSIQVHHQAHHPHTIHPRQGSSVYDGFPLTMGSFDQTISITDYSKVERSKNSTSEDDEPSFNEDGFDGQHEGGRGKKESSLPWQRVKWTNKMVRLMITAVSYIGEDITIDGGGGNGRRRFAVLQKKGKWKSVSKVMAERGYNVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPSLLDVIDFLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQCSMQLALRTRDDHDNDDIKRSHLDDHDEDEHDVEIDERDDFKDNCASRGDSKRIFGRLGGSTKKLKQNQCQEDANAFGHSSNCQDHFNKGSYPREQSVHSDGNRVIPENMRAAWLQKQWVDSRQAQLEEQKLQIQVEMLELEKQRLKWQRFSKKKDQEFEKLSLENERMKLENERMALELKRKEI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05028 437 Coils Coil 374 401 - -
Trre2g05028 437 MobiDBLite consensus disorder prediction 264 280 - -
Trre2g05028 437 MobiDBLite consensus disorder prediction 73 105 - -
Trre2g05028 437 Coils Coil 404 436 - -
Trre2g05028 437 Gene3D - 113 186 - -
Trre2g05028 437 PANTHER F16F4.11 PROTEIN-RELATED 5 437 - -
Trre2g05028 437 MobiDBLite consensus disorder prediction 264 287 - -
Trre2g05028 437 Pfam Myb/SANT-like DNA-binding domain 110 237 IPR044822 -
Trre2g05028 437 MobiDBLite consensus disorder prediction 70 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05028 Trre-Chr2 57745266 57746579 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre2g05028 Myb_DNA-bind_4 8.8e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05028 - - tpra:123906894 773.081