Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05012 ATGTCTCTTCCCATTTTCTTTTTCTTTCTTGTACCTTCATTTCTCTTCAAGCTTTCACATTCAACCACAGTTCTAGTAGATGGATCTTCAGAGTGGAAAAACCCTACTGTTTACATTGGTGATTCCATCATTTTCAAGCACAAGCAACACTACAATCTTTGCATTTTCAAGAACCAGGAAGCTTTCAATCACTGCAATTTCACTGAAGCAACTCTTCTCACTGATCCAAACACTTCTTCATACACTTGGCACCCTTCTCGTGTTGGTTTCTTCTACTTTACATTCTACAATGACTCACTCAAAGCTTGTGAAGATTCACAAAAGCTAGCCATAAAGGTTACTTCAAGTTCAACAACAGCTTCAGCACCAGAAGCTTCTTCTTCTTCTTCTTCTCCAATTGTAACTACTCCAGCACCTTCTTCTGGTGGAGATATACAATCTTCACCTTCATTTCCATGGCCTTTTCGTCCACACCAAGGTTCTTCACCAGGTCCAGCACCAACACCAGAAGCAAGTTCACCAATAACAGTTCCATTAGTACCATTTAAAGGTAATGGTGATGGCATGCCTTTCATTAACAGTAACCCTGCAGTTCCTCTGCCTACTGGTGAAGTTGACTCTGCTACCATACAACCCCTTCCTACTTCTGGCCATCAAGGACAGGTGATGATTGGATCATTTGGATTGCATATTGCTGTGCACATTATTGTTTTGCTGCTGCTGTAA 726 0.4118 MSLPIFFFFLVPSFLFKLSHSTTVLVDGSSEWKNPTVYIGDSIIFKHKQHYNLCIFKNQEAFNHCNFTEATLLTDPNTSSYTWHPSRVGFFYFTFYNDSLKACEDSQKLAIKVTSSSTTASAPEASSSSSSPIVTTPAPSSGGDIQSSPSFPWPFRPHQGSSPGPAPTPEASSPITVPLVPFKGNGDGMPFINSNPAVPLPTGEVDSATIQPLPTSGHQGQVMIGSFGLHIAVHIIVLLLL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05012 241 Gene3D - 20 116 IPR008972 -
Trre2g05012 241 SUPERFAMILY Cupredoxins 21 114 IPR008972 -
Trre2g05012 241 PANTHER OS04G0422700 PROTEIN 4 239 - -
Trre2g05012 241 MobiDBLite consensus disorder prediction 116 179 - -
Trre2g05012 241 MobiDBLite consensus disorder prediction 156 174 - -
Trre2g05012 241 MobiDBLite consensus disorder prediction 116 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05012 Trre-Chr2 57542451 57544431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05012 30 172 Phytocyanin Superfamily AT4G28365 27.027 6.70e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05012 - - gmx:100800621 305.064