Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04970 ATGAGTACTAATGAAGATATTGTTGAGAATGTTGACAATGTTGATGATGTTAACAGTGATGAAAATTTGGTCTCCACTGTCATTCTTTTATCAACATACCAAGGGTCGAGCAATGATTTGTATCTACCAATTAAGTGGGTTAGGGGCAGCCTTATTCATGAAAAACCTACAGCTGTGACACTTATCGATGCGGTCCACGATGAATATCGATGCAAAATCCGTTGGAAATACCGGAAGAACGGATCAGTGGAAGCATTTCTGACTGGTGGTTGGAAGGAATTTTGTAAGGACAATCAGTATACTGCTGGAACTAGAGTTCTGTTGTCTGTTAATCCTAGAAACCCAAAAATCATATATGGGAGGGAGGCGTTACCTGGAGAAAATTGA 387 0.3979 MSTNEDIVENVDNVDDVNSDENLVSTVILLSTYQGSSNDLYLPIKWVRGSLIHEKPTAVTLIDAVHDEYRCKIRWKYRKNGSVEAFLTGGWKEFCKDNQYTAGTRVLLSVNPRNPKIIYGREALPGEN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04970 128 Pfam B3 DNA binding domain 28 109 IPR003340 GO:0003677
Trre2g04970 128 ProSiteProfiles B3 DNA-binding domain profile. 25 128 IPR003340 GO:0003677
Trre2g04970 128 CDD B3_DNA 26 98 IPR003340 GO:0003677
Trre2g04970 128 SUPERFAMILY DNA-binding pseudobarrel domain 20 110 IPR015300 -
Trre2g04970 128 Gene3D - 3 118 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre2g04970 B3 6.7e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04970 - K06826 vun:114194236 51.9878