Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04965 ATGCATTCCCACTTAGACCGAATCCTTTGGACAGAAGACCAAATCTCTCTCCGAATCTCCCAACTAGCCGCCCAAATCGTTCGTGACTTTCCCGCTCCTTCACCTTCTCCCATCTTTATTGGCGTTCTCACCGGCGCAGTCATCTTCCTCGCTGACCTAGTTCGTAAAATTAACCTTCCCATTACTATTGATTTTGTCACTTCTAAATCCTACGGCTCCGGAACTGTCTCTAATTGCGCTCCCACCATTTCTCGTGACCTCAATGTTGACGTTAATGGCCGCCACGTCATATTGGTTGAAGACATTGTAGACACAGGACATACTTTATGTAAACTCATTGCGCACATGAAATCAAAAGGAGCATCCTCTGTATCCGTATGCACTCTACTTGACAAACCAGCAAGAAGGAAAGTGAATGTACAGTTGGTGGGTGAAGGAAAATTTTATCGAGGATTTGAGTGTCCAGACAATTTTGTTGTTGGTTATGGAATGGATTTTGACGAATTCTACAGAAATCTACCTTATATTGGTGTCTTGAAACCTGAATATTACAGTTGA 558 0.4301 MHSHLDRILWTEDQISLRISQLAAQIVRDFPAPSPSPIFIGVLTGAVIFLADLVRKINLPITIDFVTSKSYGSGTVSNCAPTISRDLNVDVNGRHVILVEDIVDTGHTLCKLIAHMKSKGASSVSVCTLLDKPARRKVNVQLVGEGKFYRGFECPDNFVVGYGMDFDEFYRNLPYIGVLKPEYYS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04965 185 Pfam Phosphoribosyl transferase domain 17 166 IPR000836 -
Trre2g04965 185 FunFam Hypoxanthine phosphoribosyltransferase 1 185 - -
Trre2g04965 185 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 2 184 - -
Trre2g04965 185 SUPERFAMILY PRTase-like 1 184 IPR029057 -
Trre2g04965 185 CDD PRTases_typeI 19 137 IPR000836 -
Trre2g04965 185 Gene3D - 1 185 IPR029057 -
Trre2g04965 185 NCBIfam hypoxanthine phosphoribosyltransferase 8 180 IPR005904 GO:0004422|GO:0006166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04965 Trre-Chr2 57123477 57125831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04965 1 184 PRT Gene Family AT1G71750 60.513 6.11e-83 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04965 K00760 - gmx:100797406 284.263