Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04964 ATGGCCATAGCCATGCATTCCCACTTAGACCGAATCCTTTGGACAGAAGACCAAATCTCTCTCCGAATCTCCCAACTAGCCGCCCAAATCGTTCGTGACTTTCCCGCTCCTTCACCTTCTCCCATCTTTATTGGCGTTCTCACCGGCGCAGTCATCTTCCTCGCTGACCTAGTTCGTAAAATTAACCTTCCCATTACTATTGATTTTGTCACTTCTAAATCCTACGGCTCCGGAACTGTCTCTAATTGCGCTCCCACCATTTCTCGTGACCTCAATGTTGACGTTAATGGCCGCCACGTCATATTGGTTGAAGACATTGTAGACACAGGACATACTTTATGTAAACTCATTGCGCACATGAAATCAAAAGGAGCATCCTCTGTATCCGTATGCACTCTACTTGACAAACCAGCAAGAAGGAAAGTGAATGTACAGTTGGTGGGTGAAGGAAAATTTTATCGAGGATTTGAGTGTCCAGACAATTTTGTTGTTGGTTATGGAATGGATTTTGACGAATTCTACAGAAATCTACCTTATATTGGTGTCTTGAAACCTGAATATTACAGTTGA 570 0.4333 MAIAMHSHLDRILWTEDQISLRISQLAAQIVRDFPAPSPSPIFIGVLTGAVIFLADLVRKINLPITIDFVTSKSYGSGTVSNCAPTISRDLNVDVNGRHVILVEDIVDTGHTLCKLIAHMKSKGASSVSVCTLLDKPARRKVNVQLVGEGKFYRGFECPDNFVVGYGMDFDEFYRNLPYIGVLKPEYYS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04964 189 SUPERFAMILY PRTase-like 4 188 IPR029057 -
Trre2g04964 189 Pfam Phosphoribosyl transferase domain 21 170 IPR000836 -
Trre2g04964 189 NCBIfam hypoxanthine phosphoribosyltransferase 12 184 IPR005904 GO:0004422|GO:0006166
Trre2g04964 189 CDD PRTases_typeI 23 141 IPR000836 -
Trre2g04964 189 Gene3D - 3 189 IPR029057 -
Trre2g04964 189 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 5 188 - -
Trre2g04964 189 FunFam Hypoxanthine phosphoribosyltransferase 4 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04964 Trre-Chr2 57123465 57125831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04964 3 188 PRT Gene Family AT1G71750 60.406 4.73e-84 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04964 K00760 - gmx:100797406 284.263