Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04938 ATGGGTTTACCTTCATCTTCATTAGACACAATCTGGTTTATGTTTACAATTCCAACCATACCACTTAACAATCTCCTCTTGGTGATCCTACTTGCACTATTTTCCATTTCATTTCTAAAATGGACTATCCCAAAAGGAGGTATAGCTTGGAGAAATAAAAGGAACCAAATGGGTCAAATCCATATACAAGGACCAAAAGGTCTCCCAATATTTGGCATCTTATTCGCCTTAAACCATGACTTACCTCACCGAACACTTGCATCCATAGCTTCAGCCCTATCGTCCACAAAACAACTCATGGCCTTTAGTTTAGGCTCAACCCCTGCAGTTATCACCTCAAACCCTAGCATAGCACGCGAAATTTTGAACTCTCCAAATTTTTCAAACCGTCCGATTAAACGATCCGCTAAAAGCCTCATGTTTAGTCGTGCCATTGGTTTTGCACCAAACAGCATCTATTGGCGTTCGCTGCGCAGGGTTGCATCAACTCACCTTTTTTCTCCAAGGCGCATTATAGCCCACGAAGCTGGTCGTAGGCTAGATTGCACCGTCATGTTAGACTCAATAGCTTATGAACAGTCCAAGCATGGATTTGTTTGTTTAAGAAAACACCTTCAAGATGCAGCTCTTAATAACGTTATGGGCACTGTTTTCGGATGTAGACTTCACAACCGAGAACAGTGCCACGTTAAAGAGCTACATGAGATGGTGAAGGAAGGGTTTGAGCTTCTAGGAGCTTTCAATTGGTCTGATTATGTGTCATGGATTAGTTTCTTTTATGATCCTTATCATATTCGTGAAAGGTGCTTAGTTCTTGCTCCTCGAGTTAAGAAATTTGTCAAGATGATTTTAGATGAACATCGAATGGCTTCTTCGTCAAAAATGATATCTGATGACTCTGACTTTGTAGATGTTCTACTCTCTCTTGAAGGGGACGAGAAGCTCCAAGACGATGACATCATTGCCATTCTATGGGAGATGATATTTCGTGGCACCGATACAACAGCACTTCTTACTGAATGGATAATGGCAGAACTTATTTTAAACCAACAAATCCAAACAAAGCTTCTTGAAGAGATTAACAACGTTGTTGGAAACAAAAACAGCGTTACAGATGCTGATGTTACAAAAATGCCATATCTCGAAGCCATTGTGAAAGAAACATTACGTGTTCATCCAATTGGGCCTCTACTTTCATGGGCCCGTTTATCCACATCAGATGTCCAGCTCAGCAATGGCATGGTGGTCCCCACCAACACAACAACAATGGTCAATATGTGGGCCATAACCCATGATCCAAATATTTGGGCCGATCCATTTGTTTTTAAGCCCGAAAGGTTTATGAAGAGTGAAGGGGGTGTTGAAGTAGATGTGAGGGGTGTTGATTTGAGGCTTGCACCATTTGGAGCTGGTCGTAGGGTTTGTCCTGGTAGGAACCTAGGACTTGTGACTGTGAGTCTTTGGGTTGCTAGATTGGTTCAAAAGTTTCATTGGGTCCAAGATATGAGTAACCCTATTGATCTTAGTGAGGTGCTCAAGTTATCTTGTGAGATGAAGAACCCTCTCAAAGGTGTAGCTATTCCTAGACTTGTTTAA 1596 0.4173 MGLPSSSLDTIWFMFTIPTIPLNNLLLVILLALFSISFLKWTIPKGGIAWRNKRNQMGQIHIQGPKGLPIFGILFALNHDLPHRTLASIASALSSTKQLMAFSLGSTPAVITSNPSIAREILNSPNFSNRPIKRSAKSLMFSRAIGFAPNSIYWRSLRRVASTHLFSPRRIIAHEAGRRLDCTVMLDSIAYEQSKHGFVCLRKHLQDAALNNVMGTVFGCRLHNREQCHVKELHEMVKEGFELLGAFNWSDYVSWISFFYDPYHIRERCLVLAPRVKKFVKMILDEHRMASSSKMISDDSDFVDVLLSLEGDEKLQDDDIIAILWEMIFRGTDTTALLTEWIMAELILNQQIQTKLLEEINNVVGNKNSVTDADVTKMPYLEAIVKETLRVHPIGPLLSWARLSTSDVQLSNGMVVPTNTTTMVNMWAITHDPNIWADPFVFKPERFMKSEGGVEVDVRGVDLRLAPFGAGRRVCPGRNLGLVTVSLWVARLVQKFHWVQDMSNPIDLSEVLKLSCEMKNPLKGVAIPRLV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04938 531 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 FunFam Cytochrome P450 78A5 54 529 - -
Trre2g04938 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Trre2g04938 531 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 Gene3D Cytochrome P450 51 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 PANTHER CYTOCHROME P450 78A7-RELATED 16 529 - -
Trre2g04938 531 Pfam Cytochrome P450 63 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g04938 531 SUPERFAMILY Cytochrome P450 64 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04938 Trre-Chr2 56968909 56971895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04938 6 525 Cytochrome P450 AT5G09970 60.377 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04938 K20619 - cave:132184017 709.909